Biography:Fabio Rinaldi

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Short description: Research scientist

Fabio Rinaldi is a research scientist at the IDSIA, Switzerland . Until 2019 he was a researcher and group leader at the University of Zurich.

He is also a group leader at the Swiss Institute of Bioinformatics (SIB),[1] and a visiting scientist at the Center for Genomic Sciences [2] (UNAM, Mexico), where he collaborates with the RegulonDB group.

He is the initiator and team leader of the OntoGene research group,[3] which focuses on Text Mining for biomedical applications.

Rinaldi is a very active contributor to the field of biomedical text mining.[4][5] He is one of the co-organizers of the well-known BioCreative[6] challenges on evaluation of biomedical text mining technologies.

Selected publications

  1. Rinaldi, F. (2008). "Laser: A review". Clinics in Dermatology 26 (6): 590–601. doi:10.1016/j.clindermatol.2007.09.014. PMID 18940539. 
  2. Rinaldi, F.; Clematide, S.; Garten, Y.; Whirl-Carrillo, M.; Gong, L.; Hebert, J. M.; Sangkuhl, K.; Thorn, C. F. et al. (2012). "Using ODIN for a PharmGKB revalidation experiment". Database 2012: bas021. doi:10.1093/database/bas021. PMID 22529178. 
  3. Rinaldi, F.; Schneider, G.; Clematide, S. (2012). "Relation mining experiments in the pharmacogenomics domain". Journal of Biomedical Informatics 45 (5): 851–861. doi:10.1016/j.jbi.2012.04.014. PMID 22580177. 
  4. Rinaldi, F.; Clematide, S.; Hafner, S.; Schneider, G.; Grigonyte, G.; Romacker, M.; Vachon, T. (2013). "Using the OntoGene pipeline for the triage task of BioCreative 2012". Database 2013: bas053. doi:10.1093/database/bas053. PMID 23396322. 
  5. Rinaldi, F.; Najafi, B. (2013). "Temperature measurement in WTE boilers using suction pyrometers". Sensors 13 (11): 15633–15655. doi:10.3390/s131115633. PMID 24248279. Bibcode: 2013Senso..1315633R. 
  6. Rinaldi, F.; Ellendorff, T. R.; Madan, S.; Clematide, S.; Van Der Lek, A.; Mevissen, T.; Fluck, J. (2016). "BioCreative V track 4: A shared task for the extraction of causal network information using the Biological Expression Language". Database 2016: baw067. doi:10.1093/database/baw067. PMID 27402677. 
  7. Sorbellini, E.; Pinto, D.; Marzani, B.; Rinaldi, F. (2018). "Drug Treatment for Androgenetic Alopecia: First Italian Questionnaire Survey on What Dermatologists Think about Finasteride". Dermatology and Therapy 8 (2): 259–267. doi:10.1007/s13555-018-0233-6. PMID 29574572. 
  8. Marzani, B.; Pinto, D.; Sorbellini, E.; Rinaldi, F. (2018). "New multi-targeting strategy in hair growth promotion: In vitro and in vivo studies". Giornale Italiano di Dermatologia e Venereologia 153 (3): 338–343. PMID 29766701. 
  9. De Padova, M. P.; Marzani, B.; Pinto, D.; Rinaldi, F. (2018). "A Single-Arm, Open-Label, Phase IV Study to Evaluate the Efficacy of a Topical Formulation for Hyperkeratotic Actinic Keratosis Lesions". Dermatology and Therapy 8 (3): 455–462. doi:10.1007/s13555-018-0252-3. PMID 30054800. 
  10. Furrer, L.; Jancso, A.; Colic, N.; Rinaldi, F. (2019). "OGER++: Hybrid multi-type entity recognition". Journal of Cheminformatics 11 (1): 7. doi:10.1186/s13321-018-0326-3. PMID 30666476. 
  11. Rinaldi, F.; Trink, A.; Pinto, D. (2020). "Efficacy of Postbiotics in a PRP-Like Cosmetic Product for the Treatment of Alopecia Area Celsi: A Randomized Double-Blinded Parallel-Group Study". Dermatology and Therapy 10 (3): 483–493. doi:10.1007/s13555-020-00369-9. PMID 32279227. 
  12. Rinaldi, F.; Trink, A.; Giuliani, G.; Pinto, D. (2021). "Italian Survey for the Evaluation of the Effects of Coronavirus Disease 2019 (COVID-19) Pandemic on Alopecia Areata Recurrence". Dermatology and Therapy 11 (2): 339–345. doi:10.1007/s13555-021-00498-9. PMID 33580408. 
  13. Davoodijam, E.; Ghadiri, N.; Lotfi Shahreza, M.; Rinaldi, F. (2021). "MultiGBS: A multi-layer graph approach to biomedical summarization". Journal of Biomedical Informatics 116. doi:10.1016/j.jbi.2021.103706. PMID 33610879. 
  14. Babino, G.; Caccavale, S.; Pinto, D.; Trink, A.; Giuliani, G.; Rinaldi, F.; Argenziano, G. (2021). "A Randomized Double-Blind Parallel-Group Study to Evaluate the Long-Term Effects of a Medical Device Containing 0.3% Octatrienoic Acid in the Treatment of Grade III Actinic Keratosis". Dermatology and Therapy 11 (5): 1751–1762. doi:10.1007/s13555-021-00594-w. PMID 34476756. 
  15. Kanjirangat, V.; Rinaldi, F. (2021). "Enhancing Biomedical Relation Extraction with Transformer Models using Shortest Dependency Path Features and Triplet Information". Journal of Biomedical Informatics 122. doi:10.1016/j.jbi.2021.103893. PMID 34481058. 
  16. Zanoli, R.; Lavelli, A.; Löffler, T.; Perez Gonzalez, N. A.; Rinaldi, F. (2022). "An annotated dataset for extracting gene-melanoma relations from scientific literature". Journal of Biomedical Semantics 13 (1): 2. doi:10.1186/s13326-021-00251-3. PMID 35045882. 
  17. Rinaldi, F.; Marotta, L.; Mascolo, A.; Amoruso, A.; Pane, M.; Giuliani, G.; Pinto, D. (2022). "Facial Acne: A Randomized, Double-Blind, Placebo-Controlled Study on the Clinical Efficacy of a Symbiotic Dietary Supplement". Dermatology and Therapy 12 (2): 577–589. doi:10.1007/s13555-021-00664-z. PMID 35061237. 
  18. Furrer, L.; Cornelius, J.; Rinaldi, F. (2022). "Parallel sequence tagging for concept recognition". BMC Bioinformatics 22 (Suppl 1): 623. doi:10.1186/s12859-021-04511-y. PMID 35331131. 

Notes

  1. ↑ "Group Page at the SIB". http://www.sib.swiss/rinaldi-fabio/. 
  2. ↑ "Center for Genomic Sciences, UNAM, Mexico". http://www.ccg.unam.mx/en. 
  3. ↑ "OntoGene web site". http://www.ontogene.org/. 
  4. ↑ Fabio Rinaldi publications indexed by Google Scholar
  5. ↑ {{DBLP}} template missing ID and not present in Wikidata.
  6. ↑ "BioCreative web site". http://www.biocreative.org/. 

External links




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