Biology:Pseudomonadales-1 RNA motif
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Revision as of 00:30, 20 August 2021 by imported>Nautica (change)
Pseudomonadales-1 | |
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![]() Consensus secondary structure and sequence conservation of Pseudomonadales-1 RNA | |
Identifiers | |
Symbol | Pseudomonadales-1 |
Rfam | RF03046 |
Other data | |
RNA type | Gene; sRNA |
SO | 0001263 |
PDB structures | PDBe |
The Pseudomonadales-1 RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] The Pseudomonadales-1 motif often exhibits an apparent sarcin-ricin loop, a type internal loop common in RNA. Pseudomonadales-1 motif RNAs are found in relatively closely related species of Pseudomonadales. Despite this narrow distribution, the Pseudomonadales-1 RNA motif does not exhibit many invariant nucleotide positions, suggesting that it does not need to be highly conserved at the primary sequence level.
Pseudomonadales-1 RNAs likely function in trans as small RNAs, as no consistent pattern of associated protein-coding genes is observed.
References
- ↑ "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. October 2017. doi:10.1093/nar/gkx699. PMID 28977401.
![]() | Original source: https://en.wikipedia.org/wiki/Pseudomonadales-1 RNA motif.
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