Biology:AsponA antisense RNA
From HandWiki
| AsponA antisense RNA | |
|---|---|
 Predicted secondary structure and sequence conservation of AsponA antisense RNA | |
| Identifiers | |
| Rfam | RF02812 |
| Other data | |
| Domain(s) | Bacteria |
| GO | 0046677 |
| SO | 0000077,0000370 |
| PDB structures | PDBe |
AsponA is a small asRNA transcribed antisense to the penicillin-binding protein 1A gene called ponA. It was identified by RNAseq and the expression was validated by 5' and 3' RACE experiments in Pseudomanas aeruginosa. AsponA expression was up or down regulated under different antibiotic stress. Owing to its location it may be able to prevent the transcription or translation of the opposite gene.[1] Study by Wurtzel et al. and Ferrara et al. also detected its expression.[2][3]
See also
References
- ↑ "Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa". BMC Genomics 15 (1): 783. September 2014. doi:10.1186/1471-2164-15-783. PMID 25213728.
- ↑ "The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature". PLOS Pathogens 8 (9): e1002945. September 2012. doi:10.1371/journal.ppat.1002945. PMID 23028334.
- ↑ "Comparative profiling of Pseudomonas aeruginosa strains reveals differential expression of novel unique and conserved small RNAs". PLOS ONE 7 (5): e36553. 2012. doi:10.1371/journal.pone.0036553. PMID 22590564. Bibcode: 2012PLoSO...736553F.
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