Biology:Flavobacterium-1 RNA motif
From HandWiki
| Flavobacterium-1 | |
|---|---|
 Consensus secondary structure and sequence conservation of Flavobacterium-1 RNA | |
| Identifiers | |
| Symbol | Flavobacterium-1 |
| Rfam | RF02976 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | 0001263 |
| PDB structures | PDBe |
The Flavobacterium-1 RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] Flavobacterium-1 motif RNAs are found in metagenomic samples from the environment, and only one example of this motif is present in a classified organism. This organism is Flavobacterium sp. SCGC AAA160-P02, which belongs to the bacterial phylum Bacteroidota.
Flavobacterium-1 RNAs likely function in trans as small RNAs, and do not exhibit a clear association with any type of protein-coding gene. Most genes nearby to Flavobacterium-1 RNAs fail to match known conserved protein domains, suggesting that they participate in a poorly studied biological process.
References
- ↑ "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. October 2017. doi:10.1093/nar/gkx699. PMID 28977401.
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