Biology:Freshwater-1 RNA motif
From HandWiki
Short description: Conserved RNA structure
| freshwater-1 | |
|---|---|
 Consensus secondary structure and sequence conservation of freshwater-1 RNA | |
| Identifiers | |
| Symbol | freshwater-1 |
| Rfam | RF02979 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | 0001263 |
| PDB structures | PDBe |
The freshwater-1 RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] Freshwater-1 motifs are found in metagenomic sequences isolated from bacteria in Freshwater and estuary environments. Freshwater-1 RNAs likely function in trans as small RNAs. Most freshwater-1 RNAs are located between tRNA genes, although no similarity between freshwater-1 RNAs and tRNAs has been observed, as of 2018.
References
- ↑ "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. October 2017. doi:10.1093/nar/gkx699. PMID 28977401.
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