Biology:Fusobacteriales-1 RNA motif
From HandWiki
Short description: Conserved RNA structure
| Fusobacteriales-1 | |
|---|---|
 Consensus secondary structure and sequence conservation of Fusobacteriales-1 RNA | |
| Identifiers | |
| Symbol | Fusobacteriales-1 |
| Rfam | RF02920 |
| Other data | |
| RNA type | Cis-reg |
| SO | 0005836 |
| PDB structures | PDBe |
The Fusobacteriales-1 RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] Fusobacteriales-1 motif RNAs are found in Fusobacteriales.
Most Fusobacteriales-1 RNAs are located upstream of genes homologous to the locus FSAG_00736, which encodes a hypothetical protein in Fusobacterium peridonticum. However, some Fusobacteriales-1 RNAs are located upstream of genes that do not appear to be homologous to FSAG_00736. Additionally 1 Fusobacteriales-1 RNAs is not found upstream of a protein-coding gene. In view of this information, it is ambiguous whether Fusobacteriales-1 RNAs function as cis-regulatory elements or whether they operate in trans.
References
- ↑ "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. October 2017. doi:10.1093/nar/gkx699. PMID 28977401.
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