Biology:KDPG-aldolase RNA motif
From HandWiki
| KDPG-aldolase | |
|---|---|
 Consensus secondary structure and sequence conservation of KDPG-aldolase RNA | |
| Identifiers | |
| Symbol | KDPG-aldolase |
| Rfam | RF03115 |
| Other data | |
| RNA type | Gene; sRNA |
| SO | 0001263 |
| PDB structures | PDBe |
The KDPG-aldolase RNA motif is a conserved RNA structure that was discovered by bioinformatics.[1] KDPG-aldolase motifs are found in Enterobacteriaceae, but is not known to be bpresent in Escherichia coli.
It is ambiguous whether KDPG-aldolase RNAs function as cis-regulatory elements or whether they operate in trans. KDPG-aldolase RNAs appear to be in the 5′ untranslated regions of enterobacterial genes that are annotated as encoding aldolases of 2-keto-3-deoxy-6-phosphogluconate or 2-keto-4-hydroxyglutarate.
References
- ↑ "Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions". Nucleic Acids Res. 45 (18): 10811–10823. October 2017. doi:10.1093/nar/gkx699. PMID 28977401.
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