Biology:Mycobiota

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Short description: Fungi present in a certain place

Mycobiota (plural noun, no singular) are a group of all the fungi present in a particular geographic region (e.g. "the mycobiota of Ireland") or habitat type (e.g. "the mycobiota of cocoa").[1][2] An analogous term for Mycobiota is funga.

Human mycobiota

Mycobiota exist on the surface and in the gastrointestinal system of humans.[3] There are as many as sixty-six genera and 184 species in the gastrointestinal tract of healthy people. Most of these are in the Candida genera.[3][4][5]

Though found to be present on the skin and in the gi tract in healthy individuals, the normal resident mycobiota can become pathogenic in those who are immunocompromized.[6][7] Such multispecies infections lead to higher mortalities.[8] In addition hospital-acquired infections by C. albicans have become a cause of major health concerns.[9][10] A high mortality rate of 40-60% is associated with systemic infection.[10][11][12][13][14][5] The best-studied of these are Candida species due to their ability to become pathogenic in immunocompromised and even in healthy hosts.[13][14][5] Yeasts are also present on the skin, such as Malassezia species, where they consume oils secreted from the sebaceous glands.[15][16][12] Pityrosporum (Malassezia) ovale, which is lipid-dependent and found only on humans. P. ovale was later divided into two species, P. ovale and P. orbiculare, but current sources consider these terms to refer to a single species of fungus, with M. furfur the preferred name.[17]

Other uses

There is a peer reviewed mycological journal titled Mycobiota.

References

  1. "LIAS Glossary". http://glossary.lias.net/wiki/Mycobiota. 
  2. "Mycobiota of cocoa: from farm to chocolate". Food Microbiology 28 (8): 1499–504. Dec 2011. doi:10.1016/j.fm.2011.08.005. PMID 21925035. 
  3. 3.0 3.1 Mukherjee, Pranab K.; Sendid, Boualem; Hoarau, Gautier; Colombel, Jean-Frédéric; Poulain, Daniel; Ghannoum, Mahmoud A. (February 2015). "Mycobiota in gastrointestinal diseases". Nature Reviews. Gastroenterology & Hepatology 12 (2): 77–87. doi:10.1038/nrgastro.2014.188. ISSN 1759-5053. PMID 25385227. 
  4. Oral and maxillofacial surgery. Oxford: Oxford University Press. 2010. pp. 446, 447. ISBN 978-0-19-920483-0. 
  5. 5.0 5.1 5.2 "Small intestinal fungal overgrowth". Curr Gastroenterol Rep 17 (4): 16. April 2015. doi:10.1007/s11894-015-0436-2. PMID 25786900. "Small intestinal fungal overgrowth (SIFO) is characterized by the presence of excessive number of fungal organisms in the small intestine associated with gastrointestinal (GI) symptoms. Candidiasis is known to cause GI symptoms particularly in immunocompromised patients or those receiving steroids or antibiotics. However, only recently, there is emerging literature that an overgrowth of fungus in the small intestine of non-immunocompromised subjects may cause unexplained GI symptoms. Two recent studies showed that 26 % (24/94) and 25.3 % (38/150) of a series of patients with unexplained GI symptoms had SIFO. The most common symptoms observed in these patients were belching, bloating, indigestion, nausea, diarrhea, and gas. ... Fungal-bacterial interaction may act in different ways and may either be synergistic or antagonistic or symbiotic [29]. Some bacteria such as Lactobacillus species can interact and inhibit both the virulence and growth of Candida species in the gut by producing hydrogen peroxide [30]. Any damage to the mucosal barrier or disruption of GI microbiota with chemotherapy or antibiotic use, inflammatory processes, activation of immune molecules and disruption of epithelial repair may all cause fungal overgrowth [27].". 
  6. Peters, Brian M.; Jabra-Rizk, Mary Ann; Scheper, Mark A.; Leid, Jeff G.; Costerton, John William; Shirtliff, Mark E. (2010). "Microbial interactions and differential protein expression in Staphylococcus aureusCandida albicans dual-species biofilms". FEMS Immunology & Medical Microbiology 59 (3): 493–503. doi:10.1111/j.1574-695X.2010.00710.x. PMID 20608978. 
  7. Lin, Yi Jey; Alsad, Lina; Vogel, Fabio; Koppar, Shardul; Nevarez, Leslie; Auguste, Fabrice; Seymour, John; Syed, Aisha et al. (2013). "Interactions between Candida albicans and Staphylococcus aureus within mixed species biofilms". BIOS 84: 30–39. doi:10.1893/0005-3155-84.1.30. 
  8. Zago, Chaiene Evelin; Silva, Sónia; Sanitá, Paula Volpato; Barbugli, Paula Aboud; Dias, Carla Maria Improta; Lordello, Virgínia Barreto; Vergani, Carlos Eduardo (2015). "Dynamics of Biofilm Formation and the Interaction between Candida albicans and Methicillin-Susceptible (MSSA) and -Resistant Staphylococcus aureus (MRSA)". PLOS ONE 10 (4): e0123206. doi:10.1371/journal.pone.0123206. PMID 25875834. Bibcode2015PLoSO..1023206Z. 
  9. Tortora, Gerald, J. (2010). Mibrobiology:an Introduction. San Francisco, CA: Pearson Benjamin Cummings. pp. 758. 
  10. 10.0 10.1 Candida and Candidiasis (2nd ed.). ASM Press. 2012. ISBN 978-1-55581-539-4. 
  11. Weinberger, M (2016-04-16). "Characteristics of candidaemia with Candida-albicans compared with non-albicans Candida species and predictors of mortality". J Hosp Infect 61 (2): 146–54. doi:10.1016/j.jhin.2005.02.009. PMID 16009456. 
  12. 12.0 12.1 "The human mycobiome in health and disease". Genome Med 5 (7): 63. July 2013. doi:10.1186/gm467. PMID 23899327. "Figure 2: Distribution of fungal genera in different body sites". 
  13. 13.0 13.1 "Candidiasis: predisposing factors, prevention, diagnosis and alternative treatment". Mycopathologia 177 (5–6): 223–240. June 2014. doi:10.1007/s11046-014-9749-1. PMID 24789109. http://repositorium.sdum.uminho.pt/bitstream/1822/31482/1/document_17753_1.pdf. Retrieved 2019-09-19. 
  14. 14.0 14.1 "Review article: fungal microbiota and digestive diseases". Aliment. Pharmacol. Ther. 39 (8): 751–766. April 2014. doi:10.1111/apt.12665. PMID 24612332. 
  15. "Human infections due to Malassezia spp". Clin. Microbiol. Rev. 5 (2): 101–19. 1 April 1992. doi:10.1128/CMR.5.2.101. PMID 1576583. 
  16. "Microbial ecology of the skin". Annu. Rev. Microbiol. 42 (1): 441–64. 1988. doi:10.1146/annurev.mi.42.100188.002301. PMID 3144238. 
  17. Template:Fitzpatrick 6