Chemistry:Standard Uptake Fraction

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The Standard Uptake Fraction (SUF) is the relative distribution of water uptake of a plant in a soil with a uniform water potential.[1][2] The SUF gives the ratio coefficient to obtain the equivalent soil water potential sensed by the plant. It is one of the macroscopic parameter for the hydraulic properties of the root system. [math]\displaystyle{ SUF = \dfrac{J_r}{T_{act}} }[/math]

[math]\displaystyle{ J_r }[/math] = the radial flow entering each root segment ([math]\displaystyle{ L^{3}T^{-1} }[/math]), and [math]\displaystyle{ T_{act} }[/math] = the actual transpiration ([math]\displaystyle{ L^{3}T^{-1} }[/math]).

In order to get this parameter, the easiest way is to deal with Functional-Structural Plant Models. They will compute the radial water flow for each root segment and then divide the total by the actual transpiration. MARSHAL is a set of online tools developed[3] to visualise the root system and allows to look after the SUF.

Standard Uptake Density

The standard uptake density (SUD) ([math]\displaystyle{ L^{-1} }[/math]) is the distribution of the water uptake flow rate in the soil where the water potential is uniform.[4] In other words:

[math]\displaystyle{ SUD = \dfrac{SUF}{L_{segment}} }[/math]

[math]\displaystyle{ L_{segment} }[/math] = the segment length ([math]\displaystyle{ L }[/math]).

Standard Sink Fraction

The standard sink fraction (SSF) is very similar to the SUF, but instead of being a function of the root segment, it is related to the soil voxel. It is the normalised distribution of the sink term in a uniform water potential soil.[4]

See also

References

  1. Couvreur, V.; Vanderborght, J.; Javaux, M. (2012). "A simple three-dimensional macroscopic root water uptake model based on the hydraulic architecture approach". Hydrology and Earth System Sciences 16 (8): 2957–2971. doi:10.5194/hess-16-2957-2012. Bibcode2012HESS...16.2957C. https://www.hydrol-earth-syst-sci.net/16/2957/2012/hess-16-2957-2012.html. 
  2. Meunier, F.; Couvreur, V.; Draye, X.; Vanderborght, J.; Javaux, M. (2017). "Towards quantitative root hydraulic phenotyping: Novel mathematical functions to calculate plant-scale hydraulic parameters from root system functional and structural traits". Journal of Mathematical Biology 75 (5): 1133–1170. doi:10.1007/s00285-017-1111-z. PMID 28255663. 
  3. Schnepf, Andrea; Leitner, Daniel; Landl, Magdalena; Lobet, Guillaume; Mai, Trung Hieu; Morandage, Shehan; Sheng, Cheng; Zoerner, Mirjam et al. (2017). "CRoot Box: A Structural-Functional Modelling Framework for Root Systems". bioRxiv: 139980. doi:10.1101/139980. https://www.biorxiv.org/content/early/2017/05/19/139980. 
  4. 4.0 4.1 Couvreur, V.; Vanderborght, J.; Javaux, M. (2012). "A simple three-dimensional macroscopic root water uptake model based on the hydraulic architecture approach". Hydrology and Earth System Sciences 16 (8): 2957–2971. doi:10.5194/hess-16-2957-2012. Bibcode2012HESS...16.2957C. http://juser.fz-juelich.de/record/22887/files/FZJ-22887.pdf.