Company:Integromics

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Short description: Bioinformatics company
Integromics SL
TypePrivate company
IndustryBiotechnology
FateAcquired by PerkinElmer in 2017
Founded2002
FounderJose Maria Carazo, Alberto D. Pascual, Vicente Rodriguez
Headquarters
Granada
,
Spain

Integromics was a global bioinformatics company headquartered in Granada, Spain and Madrid. The company had subsidiaries in the United States and United Kingdom , and distributors in 10 countries.[citation needed] Integromics specialised in bioinformatics software for data management and data analysis in genomics and proteomics. The company provided a line of products that serve the gene expression, sequencing, and proteomics markets. Customers include genomic research centers, pharmaceutical companies, academic institutions, clinical research organizations, and biotechnology companies.[citation needed]

Integromics was acquired by PerkinElmer in 2017.[1]

Partners

Integromics collaborated with international technology providers such as Applied Biosystems, Ingenuity, Spotfire, pharmaceutical companies, and academic institutions.[2][3][4][5][6]

  • RESOLVE. Resolve chronic inflammation and achieve healthy ageing by understanding non-regenerative repair[7][8]
  • LIPIDOMIC NET. Lipid droplets as dynamic organelles of the fat deposition and release: translational research towards human disease. It is managed within the EU FP7, in close collaboration with LIPID MAPS[9] and Lipid Bank.[10][11][12]
  • PROACTIVE. High throughput proteomics systems for accelerated profiling of putative plasma biomarkers.[13][14]
  • ProteomeXchange. Coordination action to establish proteomics standards. Coordinated by the European Bioinformatics Institute[15][16]
  • IRIS. Integrated computational environment for high throughput RNA Interference Screening. Coordinated by Integromics.[17]

Awards and recognition

  • 2007 - Frost & Sullivan Product Innovation of the Year Award[18]
  • 2007 - Emprendedor XXI Innovation Award[19]
  • 2010 - Accésit of Premio Sello Innovación Award[citation needed]
  • 2011 - "Best Trajectory of a Technology-Based Innovative Enterprise (EIBT) 2011" Award[citation needed]
  • 2012 - Award of the Tech Media Europe 2012[20] & ICT Finance MarketPlace

History

  • 2002 Integromics was founded as a spin-off of the National Center for Biotechnology (CNB / CSIC) in Spain and the University of Malaga. Principal founder Dr Jose Maria Carazo was motivated by a clear market need to develop new computational methods for analyzing data, with the company's first product addressing the needs of the microarray data analysis market.
  • 2007 Integromics partners with Applied Biosystems
  • 2007 Integromics Inc. Establishes US Office at Philadelphia Science Center
  • 2008 Integromics partners with TIBCO Spotfire to develop Integromics Biomarker Discovery
  • 2009 Integromics partners with Ingenuity to offer integration for Comprehensive Genomics Analysis
  • 2009 Integromics forms part of the PROACTIVE consortium to develop a unique high throughput plasma biomarker research platform
  • 2009 Integromics releases its first proteomics product
  • 2009 Integromics received a venture investment of 1M€ from I + D Unifondo
  • 2010 Integromics and TATAA Biocenter collaborate to offer comprehensive qPCR data analysis
  • 2010 Integromics releases its first Next Generation Sequencing Analysis product
  • 2010 Integromics publication in Nature describes new class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism, achieved using Integromics SeqSolve™ Next Generation Sequencing software[21][22][23]
  • 2011 Integromics and Ingenuity expand their co-operation with the integration of a fourth Integromics product to Ingenuity's IPA
  • 2011 Integromics launches OmicsHub Proteomics 2.0, a data management and analysis tool for mass spectrometry laboratories and core facilities
  • 2011 Integromics publication in Mol Cell Proteomics describes Multiplexed homogeneous proximity ligation assays for high-throughput protein biomarker research in serological material.[24]
  • 2011 Integromics publication in Cell describes novel polyadenylation genome-wide profiling, achieved using Integromics SeqSolve™ Next Generation Sequencing software[25]
  • 2012 Integromics partners with FPGMX to develop low-cost methods for clinical genomics[26]
  • 2012 Tibco Spotfire Certifies Integromics as its Sole Partner in the Fields of Genomics, Proteomics and Bioinformatics
  • 2012 Integromics Launches OmicsOffice Platform, a total solution[buzzword] that provides a streamlined and common analysis environment to analyse results from different genomics technologies and the analytical tools to compare and achieve a higher level of results using these combinations
  • 2013 Integromics partners with PerkinElmer for the Exclusive Worldwide Distributorship of New Omics Office Genomics Software from Integromics
  • 2013 Integromics partners with the Celgene Institute for Translational Research Europe (CITRE) and the Centre of Studies and Technical Research (CEIT) to implement the SANSCRIPT project
  • 2013 Integromics establishes a Key Collaboration with European HPC Experts to Develop New Big-data Computing Solutions[buzzword] for Genomics
  • 2017 Acquired by PerkinElmer

Products and services

SeqSolve

SeqSolve is software for the tertiary analysis of Next Generation Sequencing (NGS) data.[27]

RealTime StatMiner

RealTime StatMiner is a Step-by-Step Guide for RT-qPCR data analysis. RealTime StatMiner is available as a standalone as well as a TIBCO Spotfire compatible application. Co-developed with Applied Biosystems.[28]

Integromics Biomarker Discovery

Integromics Biomarker Discovery (IBD) for microarray gene expression data analysis guides the user throughout a step-by-step workflow.[29]

OmicsHub Proteomics

OmicsHub® Proteomics is a platform for the central management and analysis of data in proteomics labs.[30]

See also

References

  1. ↑ "Genestack offers 'missing link' for genomics drug discovery" (in en). https://www.cambridgenetwork.co.uk/news/genestack-offers-missing-link-for-genomics-drug-discovery/. 
  2. ↑ "TIBCO Spotfire - Discover Spotfire". Spotfire.tibco.com. http://spotfire.tibco.com/products/ibd.aspx. Retrieved 2012-07-26. 
  3. ↑ "TIBCO Spotfire - News". Spotfire.tibco. http://spotfire.tibco.com/about-spotfire/news-room/press-releases/2008/02_19_2008.aspx. Retrieved 2012-07-26. 
  4. ↑ "TIBCO Spotfire - News". Spotfire.tibco.. http://spotfire.tibco.com/about-spotfire/news-room/press-releases/2009/10_19_09_Integromics.aspx. Retrieved 2012-07-26. 
  5. ↑ "Ingenuity Systems". Ingenuity.. 2009-06-02. http://www.ingenuity.com/news/html/pr_090602_integromics.html. Retrieved 2012-07-26. 
  6. ↑ "Press Release - Ingenuity Systems Chosen to be Sole Pathways Provider for Integromics in Andalusian Core Facility". Ingenuity.. 2007-06-20. http://www.ingenuity.com/news/html/pr_070620_integromics.html. Retrieved 2012-07-26. 
  7. ↑ "European Commission : CORDIS : Projects 86774". cordis.europa.eu. http://cordis.europa.eu/projects/index.cfm?fuseaction=app.details&TXT=resolve&FRM=1&STP=10&SIC=&PGA=&CCY=&PCY=&SRC=&LNG=en&REF=86774. Retrieved 2012-09-19. 
  8. ↑ "Eduardo González Couto". Resolve.punkt-international.eu. http://resolve.punkt-international.eu/index.php?id=208. Retrieved 2012-07-26. 
  9. ↑ "LIPID MAPS Databases : LIPID MAPS Lipidomics Gateway". Lipidmaps.. http://www.lipidmaps.org/data/databases.html. Retrieved 2012-07-26. 
  10. ↑ "LipidBank". Lipidbank.jp. 2007-06-19. http://lipidbank.jp/. Retrieved 2012-07-26. 
  11. ↑ "P21 Integromics SL - LipidomicsWiki". Lipidomicnet.. http://www.lipidomicnet.org/index.php/P21_INTEGROMICS. Retrieved 2012-07-26. 
  12. ↑ "European Commission : CORDIS : Projects 88230". cordis.europa.eu. http://cordis.europa.eu/projects/index.cfm?fuseaction=app.details&TXT=lipidom&FRM=1&STP=10&SIC=&PGA=&CCY=&PCY=&SRC=&LNG=en&REF=88230. Retrieved 2012-09-19. 
  13. ↑ "Proactive - Start | Olink Bioscience". Olink.. 2012-07-17. http://www.olink.com/proactive. Retrieved 2012-07-26. 
  14. ↑ [1][|permanent dead link|dead link}}]
  15. ↑ "European Commission : CORDIS : Projects 100493". cordis.europa.eu. http://cordis.europa.eu/projects/index.cfm?fuseaction=app.details&TXT=proteomexchange&FRM=1&STP=10&SIC=&PGA=&CCY=&PCY=&SRC=&LNG=en&REF=100493. Retrieved 2012-09-19. 
  16. ↑ Short Name: ITG. "Integromics". proteomeXchange. http://www.proteomexchange.org/partners/integromics. Retrieved 2012-07-26. 
  17. ↑ Cenix BioScience GmbH (2010-11-11). "News Releases | News & Archive | Cenix BioScience". Cenix.. http://www.cenix.com/news/pr/lidnr_45/plgnr_en. Retrieved 2012-07-26. 
  18. ↑ "Frost & Sullivan Honours Healthcare Leaders at 2008 Excellence in Healthcare Awards Banquet". Frost.. 2008-02-22. http://www.frost.com/prod/servlet/press-release.pag?ctxixpLink=FcmCtx1&searchQuery=integromics&bdata=aHR0cDovL3d3dy5mcm9zdC5jb20vc3JjaC9jYXRhbG9nLXNlYXJjaC5kbz9xdWVyeVRleHQ9aW50ZWdyb21pY3NAfkBTZWFyY2ggUmVzdWx0c0B%2BQDEzMzAzNjA5NDU5MTQ%3D&docid=122522741&ctxixpLabel=FcmCtx2. Retrieved 2012-07-26. 
  19. ↑ "PREMIO EMPRENDEDORXXI 2009". Premio2009.emprendedorxxi.es. http://premio2009.emprendedorxxi.es/html/ganadores2007_integromics.html. Retrieved 2012-07-26. 
  20. ↑ "Tech Media Europe 2012". e-unlimited. 2012-02-03. http://www.e-unlimited.com/events/view.aspx?events_pages_id=1255. Retrieved 2014-03-05. 
  21. ↑ Philipp Kapranov; Fatih Ozsolak; Sang Woo Kim; Sylvain Foissac; Doron Lipson; Chris Hart; Steve Roels; Christelle Borel et al. (2010-07-29). "New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism". Nature 466 (7306): 642–646. doi:10.1038/nature09190. PMID 20671709. Bibcode: 2010Natur.466..642K. 
  22. ↑ "LifeScience: NextGen Sequencing publication by Spotfire partner Integromics - TIBCO Spotfire Community". Spotfire.tibco. http://spotfire.tibco.com/community/forums/t/901.aspx. Retrieved 2012-07-26. 
  23. ↑ 6/2/2011 6:47:43 PM (2011-02-06). "Helicos and Integromics Identify New Class of Short RNA in Human Cells". Bio-IT World. http://www.bio-itworld.com/news/07/28/10/Helicos-Integromics-new-class-short-RNA.html. Retrieved 2012-07-26. 
  24. ↑ "Multiplexed Homogeneous Proximity Ligation Assays for High-throughput Protein Biomarker Research in Serological Material". Mcponline.. http://www.mcponline.org/content/10/4/M110.004978.long. Retrieved 2012-07-26. 
  25. ↑ Ozsolak, Fatih; Kapranov, Philipp; Foissac, Sylvain; Kim, Sang Woo; Fishilevich, Elane; Monaghan, A. Paula; John, Bino; Milos, Patrice M. (2010-12-10). "Comprehensive Polyadenylation Site Maps in Yeast and Human Reveal Pervasive Alternative Polyadenylation". Cell 143 (6): 1018–1029. doi:10.1016/j.cell.2010.11.020. PMID 21145465. 
  26. ↑ "Integromics partners with FPGMX to develop low-cost methods for clinical genomics — Integromics". Integromics.. 2012-02-02. http://www.integromics.com/genomics-and-proteomics-data-management/integromics-partners-with-fpgmx-to-develop-low-cost-methods-for-clinical-genomics. Retrieved 2012-07-26. 
  27. ↑ "SeqSolve™ - Next generation sequencing (NGS) — Integromics". Integromics.. 2011-02-28. http://www.integromics.com/genomics-data-analysis/ngs-next-generation-sequencing-analysis. Retrieved 2012-07-26. 
  28. ↑ "RealTime StatMiner® - PCR Analysis — Integromics". Integromics.. 2011-02-25. http://www.integromics.com/genomics-data-analysis/pcr-analysis. Retrieved 2012-07-26. 
  29. ↑ "Integromics Biomarker Discovery® - Microarray analysis — Integromics". Integromics.. 2011-02-28. http://www.integromics.com/genomics-data-analysis/microarray-analysis. Retrieved 2012-07-26. 
  30. ↑ "OmicsHub® - Proteomics data management — Integromics". Integromics.. 2011-02-25. http://www.integromics.com/proteomics-data-management. Retrieved 2012-07-26. 



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