Hopkins statistic

From HandWiki

The Hopkins statistic (introduced by Brian Hopkins and John Gordon Skellam) is a way of measuring the cluster tendency of a data set.[1] It belongs to the family of sparse sampling tests. It acts as a statistical hypothesis test where the null hypothesis is that the data is generated by a Poisson point process and are thus uniformly randomly distributed.[2] If individuals are aggregated, then its value approaches 1, and if they are randomly distributed along the value tends to 0.5.[3]

Preliminaries

A typical formulation of the Hopkins statistic follows.[2]

Let X be the set of n data points.
Generate a random sample X∼ of m≪n data points sampled without replacement from X.
Generate a set Y of m uniformly randomly distributed data points.
Define two distance measures,
ui, the minimum distance (given some suitable metric) of yi∈Y to its nearest neighbour in X, and
wi, the minimum distance of x∼i∈X∼⊆X to its nearest neighbour xj∈X,xi∼≠xj.

Definition

With the above notation, if the data is d dimensional, then the Hopkins statistic is defined as:[4]

H=∑i=1muid∑i=1muid+∑i=1mwid

Under the null hypotheses, this statistic has a Beta(m,m) distribution.

Notes and references

  1. ↑ Hopkins, Brian; Skellam, J.G. (1954). "A new method for determining the type of distribution of plant individuals". Annals of Botany (Annals Botany Co) 18 (2): 213–227. doi:10.1093/oxfordjournals.aob.a083391. 
  2. ↑ 2.0 2.1 Banerjee, A. (2004). "Validating clusters using the Hopkins statistic". 2004 IEEE International Conference on Fuzzy Systems (IEEE Cat. No.04CH37542). 1. pp. 149–153. doi:10.1109/FUZZY.2004.1375706. ISBN 0-7803-8353-2. 
  3. ↑ Aggarwal, Charu C. (2015) (in en). Data Mining. Cham: Springer International Publishing. pp. 158. doi:10.1007/978-3-319-14142-8. ISBN 978-3-319-14141-1. https://link.springer.com/10.1007/978-3-319-14142-8. 
  4. ↑ Cross, G.R.; Jain, A.K. (1982). "MEASUREMENT OF CLUSTERING TENDENCY**Research supported in part by NSF Grant ECS-8007106". Measurement of clustering tendency. 315–320. doi:10.1016/B978-0-08-027618-2.50054-1. ISBN 978-0-08-027618-2.