Biology:Allobaculum
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Allobaculum is a Gram-positive, non-spore-forming bacterial, strictly anaerobic and non-motile genus from the family Erysipelotrichaceae, with known species Allobaculum stercoricanis[1][2][3] and Allobaculum mucolyticum.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[4]
| 16S rRNA based LTP_10_2024[5][6][7] | 120 marker proteins based GTDB 09-RS220[8][9][10] | ||||||||||||||||||||||||||||||
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References
- ↑ 1.0 1.1 J.P. Euzéby. "Allobaculum". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/allobaculum.
- ↑ Allobaculum. https://www.uniprot.org/taxonomy/174708.
- ↑ "Allobaculum" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. 1 January 2015. pp. 1–2. doi:10.1002/9781118960608.gbm00759. ISBN 978-1-118-96060-8.
- ↑ Sayers. "Allobaculum". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=174708&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
- Greetham, Hazel L.; Gibson, Glen R; Giffard, Catriona; Hippe, Hans; Merkhoffer, Birgit; Steiner, Ulrike; Falsen, Enevold; Collins, Matthew D. (1 October 2004). "Allobaculum stercoricanis gen. nov., sp. nov., isolated from canine feces". Anaerobe 10 (5): 301–307. doi:10.1016/j.anaerobe.2004.06.004. PMID 16701531.
- van Muijlwijk, G. H.; van Mierlo, G; Jansen, P. W. T. C; Vermeulen, M; Bleumink-Pluym, N. M. C.; Palm, N.W.; van Putten, J.P.M.; de Zoete, M. R (30 August 2021). "Identification of Allobaculum mucolyticum as a novel human intestinal mucin degrader". Gut Microbes 13 (1). doi:10.1080/19490976.2021.1966278. PMID 34455931.
Wikidata ☰ Q3612599 entry
