Biology:Anaerostipes
Anaerostipes is a Gram positive and anaerobic bacterial genus from the family of Lachnospiraceae.[1][2][3] Anaerostipes occurs in the human gut.[4] Anaerostipes may protect against colon cancer in humans by producing butyric acid.[5]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[6]
| 16S rRNA based LTP_10_2024[7][8][9] | 120 marker proteins based GTDB 09-RS220[10][11][12] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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References
- ↑ 1.0 1.1 A.C. Parte. "Anaerostipes". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/anaerostipes.
- ↑ Anaerostipes. https://www.uniprot.org/taxonomy/207244.
- ↑ "Anaerostipes" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. 1 January 2015. pp. 1–4. doi:10.1002/9781118960608.gbm00638. ISBN 9781118960608.
- ↑ Andreas, Schwiertz (2016). Microbiota of the Human Body: Implications in Health and Disease. Springer. ISBN 978-3-319-31248-4.
- ↑ Xia, Li C.; Liu, Gang; Gao, Yingxin; Li, Xiaoxin; Pan, Hongfei; Ai, Dongmei (2019). "Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model" (in English). Frontiers in Microbiology 10: 826. doi:10.3389/fmicb.2019.00826. ISSN 1664-302X. PMID 31068913.
- ↑ Sayers. "Anaerostipes". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=207244&lvl=3&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
- Schwiertz, A; Hold, GL; Duncan, SH; Gruhl, B; Collins, MD; Lawson, PA; Flint, HJ; Blaut, M (April 2002). "Anaerostipes caccae gen. nov., sp. nov., a new saccharolytic, acetate-utilising, butyrate-producing bacterium from human faeces.". Systematic and Applied Microbiology 25 (1): 46–51. doi:10.1078/0723-2020-00096. PMID 12086188. Bibcode: 2002SyApM..25...46S.
- Kant, Ravi; Rasinkangas, Pia; Satokari, Reetta; Pietilä, Taija E.; Palva, Airi (2 April 2015). "Genome Sequence of the Butyrate-Producing Anaerobic Bacterium Anaerostipes hadrus PEL 85". Genome Announcements 3 (2): e00224-15. doi:10.1128/genomeA.00224-15. PMID 25838483.
- De Vos, Paul, ed (2009). Bergey's manual of systematic bacteriology. (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
Wikidata ☰ Q3614922 entry
