Biology:Aquificaceae
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Short description: Family of bacteria
| Aquificaceae | |
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Scientific classification 
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| Domain: | Bacteria |
| Phylum: | Aquificota |
| Order: | Aquificales |
| Family: | Aquificaceae Reysenbach 2002 em. Gupta & Lali 2013 |
| Genera | |
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The Aquificaceae family are bacteria that live in harsh environmental settings such as hot springs, sulfur pools, and hydrothermal vents. Although they are true bacteria as opposed to the other inhabitants of extreme environments, the Archaea, Aquificaceae genera are an early phylogenetic branch.[1]
Phylogeny
| 16S rRNA-based LTP release 132 by The All-Species Living Tree Project[2] | Annotree v1.2.0[3][4] which uses the GTDB 05-RS95 (Genome Taxonomy Database)[5][6] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Taxonomy
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN)[7] and the National Center for Biotechnology Information (NCBI).[8]
- Genus Aquifex Huber and Stetter 1992
- Species A. pyrophilus Huber and Stetter 1992 (type sp.)
- Species "A. aeolicus" Huber and Stetter 2001
- Genus Hydrogenivirga Nakagawa et al. 2004
- Species H. calditorris Nakagawa et al. 2004 (type sp.)
- Species H. okinawensis Nunoura et al. 2008
- Genus Hydrogenobacter Kawasumi et al. 1984
- Species H. hydrogenophilus (Kryukov et al. 1984) Stöhr et al. 2001
- Species H. subterraneus Takai et al. 2001
- Species H. thermophilus Kawasumi et al. 1984 (type sp.)
- Genus Thermocrinis Huber et al. 1999
- Species T. albus Eder and Huber 2002
- Species T. jamiesonii Dodsworth et al. 2015
- Species T. minervae Huber et al. 1999
- Species T. ruber Huber et al. 1999 (type sp.)
References
- Reysenbach A-L, Phylum BI (2001) Aquificae phy. nov. In: Boone DR, Castenholz RW (eds) Bergey’s Manual of Systematic Bacteriology. Springer-Verlag, Berlin, 2nd edn., pp. 359–367
- ↑ Madigan M, ed (2005). Brock Biology of Microorganisms (11th ed.). Prentice Hall. ISBN 0-13-144329-1.
- ↑ All-Species Living Tree Project."16S rRNA-based LTP release 132". Silva Comprehensive Ribosomal RNA Database. https://itol.embl.de/tree/37201229170412631528207598. Retrieved 2015-08-20.
- ↑ "AnnoTree v1.2.0". http://annotree.uwaterloo.ca/app/.
- ↑ Mendler, K; Chen, H; Parks, DH; Hug, LA; Doxey, AC (2019). "AnnoTree: visualization and exploration of a functionally annotated microbial tree of life". Nucleic Acids Research 47 (9): 4442–4448. doi:10.1093/nar/gkz246. PMID 31081040. PMC 6511854. https://academic.oup.com/nar/article/47/9/4442/5432638.
- ↑ "GTDB release 05-RS95". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ Parks, DH; Chuvochina, M; Chaumeil, PA; Rinke, C; Mussig, AJ; Hugenholtz, P (September 2020). "A complete domain-to-species taxonomy for Bacteria and Archaea.". Nature Biotechnology 38 (9): 1079–1086. doi:10.1038/s41587-020-0501-8. PMID 32341564. https://www.researchgate.net/publication/340954053.
- ↑ "Aquificaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/family/aquificaceae.
- ↑ Sayers. "Aquificaceae". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=64898&lvl=3&lin=f&keep=1&srchmode=1&unlock.
Wikidata ☰ Q3250820 entry
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