Biology:Caldicoprobacter
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Caldicoprobacter is a genus of bacteria from the family Caldicoprobacteraceae.[1][2][3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[4]
| 16S rRNA based LTP_10_2024[5][6][7] | 120 marker proteins based GTDB 09-RS220[8][9][10] | ||||||||||||||||||||||||||||||||||||
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References
- ↑ 1.0 1.1 J.P. Euzéby. "Caldicoprobacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/caldicoprobacter.
- ↑ (in en) Caldicoprobacter. https://www.uniprot.org/taxonomy/715222.
- ↑ Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M (2010). "Nomenclature Abstract for Caldicoprobacter Yokoyama et al. 2010 emend. Bouanane-Darenfed et al. 2011." (in en). The NamesforLife Abstracts. doi:10.1601/nm.15035.
- ↑ Sayers. "Caldicoprobacter". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=715222&lvl=3&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
- Bouanane-Darenfed, A; Fardeau, ML; Grégoire, P; Joseph, M; Kebbouche-Gana, S; Benayad, T; Hacene, H; Cayol, JL et al. (March 2011). "Caldicoprobacter algeriensis sp. nov. a new thermophilic anaerobic, xylanolytic bacterium isolated from an Algerian hot spring.". Current Microbiology 62 (3): 826–32. doi:10.1007/s00284-010-9789-9. PMID 20981546.
- Yokoyama, H; Wagner, ID; Wiegel, J (January 2010). "Caldicoprobacter oshimai gen. nov., sp. nov., an anaerobic, xylanolytic, extremely thermophilic bacterium isolated from sheep faeces, and proposal of Caldicoprobacteraceae fam. nov.". International Journal of Systematic and Evolutionary Microbiology 60 (Pt 1): 67–71. doi:10.1099/ijs.0.011379-0. PMID 19648349.
- Li, Fu-Li (2015) (in en). Thermophilic Microorganisms. Caister Academic Press. ISBN 9781910190142.
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