Biology:Computational anatomy toolbox
From HandWiki
 | |
| Developer(s) | Structural Brain Mapping Group Christian Gaser Robert Dahnke |
|---|---|
| Stable release | 12.9
/ 25 May 2024 |
| Repository | github |
| Written in | Matlab, C |
| Operating system | Linux, macOS, Windows |
| Platform | MATLAB, SPM |
| Type | Neuroimaging data analysis |
| License | GNU General Public License |
| Website | neuro-jena |
CAT (computational anatomy toolbox) is a free and open source software package used for the analysis of structural brain imaging data, in particular magnetic resonance imaging (MRI).[1] Developed by Christian Gaser and Robert Dahnke of the Structural Brain Mapping Group at the University of Jena, CAT is an extension of the SPM software.
Functionality
CAT provides tools for voxel-based morphometry (VBM),[2] cortical thickness,[3] folding,[4] and gyrification[5] analysis, as well as volume or surface estimates within predefined brain regions of interest.
Related software
References
- ↑ "CAT: a computational anatomy toolbox for the analysis of structural MRI data". GigaScience 13. Aug 2024. doi:10.1093/gigascience/giae049. PMID 39102518.
- ↑ "Voxel-based morphometry--the methods". NeuroImage 11 (6): 805–21. Jun 2000. doi:10.1006/nimg.2000.0582. PMID 10860804.
- ↑ "Cortical thickness and central surface estimation". NeuroImage 65: 336–48. Jan 2013. doi:10.1016/j.neuroimage.2012.09.050. PMID 23041529.
- ↑ "Local cortical surface complexity maps from spherical harmonic reconstructions". NeuroImage 56 (3): 961–73. Jun 2011. doi:10.1016/j.neuroimage.2011.02.007. PMID 21315159.
- ↑ "A curvature-based approach to estimate local gyrification on the cortical surface". NeuroImage 29 (4): 1224–30. Jul 2009. doi:10.1016/j.neuroimage.2005.08.049. PMID 16223589.
 |  |
