Biology:Geoalkalibacter
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Short description: Genus of bacteria
| Geoalkalibacter | |
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Scientific classification 
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| Missing taxonomy template (fix): | Geoalkalibacter |
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| Geoalkalibacter ferrihydriticus Zavarzina et al. 2007
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Geopsychrobacter is a genus of bacteria from the order Desulfuromonadales.[1][3][4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[5]
| 16S rRNA based LTP_10_2024[6][7][8] | 120 marker proteins based GTDB 09-RS220[9][10][11] | ||||||||||||||||||||||||
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References
- ↑ 1.0 1.1 1.2 A.C. Parte. "Geoalkalibacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/Geoalkalibacter.
- ↑ "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities". Int J Syst Evol Microbiol 70 (11): 5972–6016. 2020. doi:10.1099/ijsem.0.004213. PMID 33151140.
- ↑ (in en) Geoalkalibacter. https://www.uniprot.org/taxonomy/392332.
- ↑ Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). "Nomenclature Abstract for Geoalkalibacter Zavarzina et al. 2007 emend. Greene et al. 2009." (in en). The NamesforLife Abstracts. doi:10.1601/nm.10380.
- ↑ Sayers. "Geoalkalibacter". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=392332&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
- Greene, AC; Patel, BK; Yacob, S (April 2009). "Geoalkalibacter subterraneus sp. nov., an anaerobic Fe(III)- and Mn(IV)-reducing bacterium from a petroleum reservoir, and emended descriptions of the family Desulfuromonadaceae and the genus Geoalkalibacter.". International Journal of Systematic and Evolutionary Microbiology 59 (Pt 4): 781–5. doi:10.1099/ijs.0.001537-0. PMID 19329606.
- Zavarzina, DG; Kolganova, TV; Bulygina, ES; Kostrikina, NA; Turova, TP; Zavarzin, GA (2005). "[Geoalkalibacter ferrihydriticus gen. nov., sp. nov., the first alkaliphilic representative of the family Geobacteraceae, isolated from a soda lake].". Mikrobiologiia 75 (6): 775–85. PMID 17205802.
- Pierra, Mélanie; Carmona-Martínez, Alessandro A.; Trably, Eric; Godon, Jean-Jacques; Bernet, Nicolas (December 2015). "Specific and efficient electrochemical selection of Geoalkalibacter subterraneus and Desulfuromonas acetoxidans in high current-producing biofilms". Bioelectrochemistry 106 (Pt A): 221–225. doi:10.1016/j.bioelechem.2015.02.003. PMID 25717030. https://hal.inrae.fr/hal-02630636.
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