Biology:Halolactibacillus

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Halolactibacillus is a Gram-positive, non-spore-forming and motile genus of bacteria from the family Bacillaceae.[1][2][3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
Halolactibacillus
 

H. alkaliphilus Cao et al. 2008

 
 
 

H. halophilus Ishikawa et al. 2005

 
 

H. miurensis Ishikawa et al. 2005

 
 
 
Halolactibacillus
 

H. alkaliphilus

 
 
 

H. halophilus

 
 

H. miurensis

 
 
 

References

  1. ↑ 1.0 1.1 A.C. Parte. "Halolactibacillus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halolactibacillus. 
  2. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named UniProt
  3. ↑ Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). "Nomenclature Abstract for Halolactibacillus Ishikawa et al. 2005 emend. Cao et al. 2008." (in en). The NamesforLife Abstracts. doi:10.1601/nm.9706. 
  4. ↑ Ishikawa, Morio; Yamasato, Kazuhide (2015). "Halolactibacillus" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–10. doi:10.1002/9781118960608.gbm00536. ISBN 978-1-118-96060-8. 
  5. ↑ C.L. Schoch. "Halolactibacillus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=306539&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Ishikawa, M; Nakajima, K; Itamiya, Y; Furukawa, S; Yamamoto, Y; Yamasato, K (November 2005). "Halolactibacillus halophilus gen. nov., sp. nov. and Halolactibacillus miurensis sp. nov., halophilic and alkaliphilic marine lactic acid bacteria constituting a phylogenetic lineage in Bacillus rRNA group 1.". International Journal of Systematic and Evolutionary Microbiology 55 (Pt 6): 2427–39. doi:10.1099/ijs.0.63713-0. PMID 16280507. 
  • Cao, SJ; Qu, JH; Yang, JS; Sun, Q; Yuan, HL (September 2008). "Halolactibacillus alkaliphilus sp. nov., a moderately alkaliphilic and halophilic bacterium isolated from a soda lake in Inner Mongolia, China, and emended description of the genus Halolactibacillus.". International Journal of Systematic and Evolutionary Microbiology 58 (Pt 9): 2169–73. doi:10.1099/ijs.0.65511-0. PMID 18768624. 

Wikidata ☰ Q26212546 entry



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