Biology:Holdemania
From HandWiki
Holdemania is a Gram-positive, strictly anaerobic and non-spore-forming genus from the family Erysipelotrichaceae, with two known species: Holdemania filiformis[1][2][3] and Holdemania massiliensis.[4]
This genus was named after Lilian V. Holdeman an American microbiologist from the Anaerobe Lab at Virginia Tech.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]
| 16S rRNA based LTP_10_2024[6][7][8] | 120 marker proteins based GTDB 09-RS220[9][10][11] | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
References
- ↑ 1.0 1.1 J.P. Euzéby. "Holdemania". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/holdemania.
- ↑ Holdemania. https://www.uniprot.org/taxonomy/61170.
- ↑ Willems, Anne (1 January 2015). "Holdemania" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–5. doi:10.1002/9781118960608.gbm00764. ISBN 9781118960608.
- ↑ Holdemania massiliensis. https://www.uniprot.org/taxonomy/1468449.
- ↑ Sayers. "Holdemania". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=61170&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
- Mishra, Ajay Kumar; Lagier, Jean-Christophe; Pfleiderer, Anne; Nguyen, Thi Thien; Caputo, Aurelia; Raoult, Didier; Fournier, Pierre-Edouard (15 December 2013). "Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov". Standards in Genomic Sciences 9 (2): 395–409. doi:10.4056/sigs.4628316. PMID 24976895. Bibcode: 2013SGenS...9..395M.
- Paul, De Vos (2009). Bergey's manual of systematic bacteriology. (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
Wikidata ☰ Q26220008 entry
 |  |
