Biology:MICdb
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| File:Database.png | |
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| Content | |
| Description | prokaryotic microsatellites. |
| Organisms | prokaryotes |
| Contact | |
| Primary citation | Vattipally B Sreenu (2003) & al.[1] |
| Access | |
| Website | http://www.cdfd.org.in/micas |
MICdb (Microsatellites database) is a database of non-redundant microsatellites from prokaryotic genomes.[1]
Following the release of MICdb in 2003, the database has been updated to MICdb 3.0 as of 2014.[2][3] Version 3.0 of the database contains information for 4,772 baterial and 271 archeal genomes.[3]
The MICAS (Microsatellite Analysis Server) webserver is based on the MICdb database and integrates the use of MICdb with other tools for finding microsatellites and designing primers.[3]
See also
- InSatDb
- Microsatellite
References
- ↑ 1.0 1.1 Sreenu, Vattipally B; Alevoor Vishwanath; Nagaraju Javaregowda; Nagarajaram Hampapathalu A (Jan 2003). "MICdb: database of prokaryotic microsatellites". Nucleic Acids Res. (England) 31 (1): 106–8. doi:10.1093/nar/gkg002. PMID 12519959.
- ↑ Mudunuri, Suresh B.; Patnana, Sujan; Nagarajaram, Hampapathalu A. (2014). "MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes". Database: The Journal of Biological Databases and Curation 2014. doi:10.1093/database/bau005. ISSN 1758-0463. PMID 24536078.
- ↑ 3.0 3.1 3.2 Sreenu, Vattipally B.; Ranjitkumar, Gundu; Swaminathan, Sugavanam; Priya, Sasidharan; Bose, Buddhaditta; Pavan, Mogili N.; Thanu, Geeta; Nagaraju, Javaregowda et al. (2003). "MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences". Applied Bioinformatics 2 (3): 165–168. ISSN 1175-5636. PMID 15130803.
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