Biology:MiRTarBase
From HandWiki
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| Content | |
| Description | Experimentally validated microRNA-target interactions (MTIs). |
| Data types captured | miRNA-target interactions |
| Contact | |
| Research centre | National Chiao Tung University |
| Laboratory | Institute of Bioinformatics and Systems Biology |
| Author(s) | Sheng-Da Hsu |
| Primary citation | Hsu & al. (2011)[1] |
| Release date | 2013 |
| Access | |
| Website | http://mirtarbase.cuhk.edu.cn |
| Download URL | http://mirtarbase.cuhk.edu.cn/php/download.php |
| Miscellaneous | |
| Version | 4.5 |
miRTarBase [1] is a curated database of MicroRNA-Target Interactions. As a database, miRTarBase has accumulated more than fifty thousand miRNA-target interactions (MTIs), which are collected by manually surveying pertinent literature after data mining of the text systematically to filter research articles related to functional studies of miRNAs. Generally, the collected MTIs are validated experimentally by reporter assay, western blot, microarray and next-generation sequencing experiments. While containing the largest amount of validated MTIs, the miRTarBase provides the most updated collection by comparing with other similar, previously developed databases.
See also
References
- ↑ 1.0 1.1 "miRTarBase: a database curates experimentally validated microRNA-target interactions.". Nucleic Acids Research 39 (Database issue): D163-9. 2011. doi:10.1093/nar/gkq1107. PMID 21071411.
External links
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