Biology:NADH:ubiquinone reductase (non-electrogenic)

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Short description: Class of enzymes
NADH:ubiquinone reductase (non-electrogenic)
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.png
Structure of NADH dehydrogenase (quinone). PDB entry 3iam[1]
Identifiers
EC number1.6.5.9
CAS number9028-04-0
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Gene OntologyAmiGO / QuickGO

NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9, NDH-2, ubiquinone reductase, coenzyme Q reductase, dihydronicotinamide adenine dinucleotide-coenzyme Q reductase, DPNH-coenzyme Q reductase, DPNH-ubiquinone reductase, NADH-coenzyme Q oxidoreductase, NADH-coenzyme Q reductase, NADH-CoQ oxidoreductase, NADH-CoQ reductase) is an enzyme with systematic name NADH:ubiquinone oxidoreductase.[2][3][4][5] This enzyme catalyses the following chemical reaction:

NADH + H+ + a quinone [math]\displaystyle{ \rightleftharpoons }[/math] NAD+ + a quinol

The 3 substrates of this enzyme are NADH, H+, and a quinone (electron acceptor), whereas its two products are NAD+ and a quinol (reduced acceptor).

An important example of this reaction is:

NADH + H+ + ubiquinone [math]\displaystyle{ \rightleftharpoons }[/math] NAD+ + ubiquinol

This enzyme is a flavoprotein (FAD). It belongs to the family of oxidoreductases, specifically those acting on NADH or NADPH with other acceptors. The systematic name of this enzyme class is NADH:(quinone-acceptor) oxidoreductase. Other names in common use include reduced nicotinamide adenine dinucleotide (quinone) dehydrogenase, NADH-quinone oxidoreductase, NADH ubiquinone oxidoreductase, DPNH-menadione reductase, D-diaphorase, and NADH2 dehydrogenase (quinone), and mitochondrial (mt) complex I. This enzyme participates in oxidative phosphorylation. Several compounds are known to inhibit this enzyme, including AMP, and 2,4-dinitrophenol. NADH dehydrogenase is involved in the first step of the electron transport chain of oxidative phosphorylation (OXPHOS). Any change in the electron transport component caused by a mutation might effect the normal electron flow. This might be leading "an increase of bifurcation and generation of superoxidase radicals and increase oxidative stress in various types of cancer cells."[6]

In the electron transport chain NADH is mainly used to create a concentration gradient of hydrogen in order to make ATP. Since After NADH is oxidized a hydrogen is pumped out and NAD+ will be a product.[7]

Structural studies

Several structures are available of this enzyme, which is part of the respiratory chain. It is a multi-subunit enzyme in which this activity is located in the hydrophilic domain. The subunits of the membrane-embedded domain are responsible for proton translocation.

References

  1. "Structural basis for the mechanism of respiratory complex I". J Biol Chem 284 (43): 29773–83. 2009. doi:10.1074/jbc.M109.032144. PMID 19635800. 
  2. Moller, I.M; Palmer, J.M. (1982). "Direct evidence for the presence of a rotenone-resistant NADH dehydrogenase on the inner surface of plant mitochondria". Physiologia Plantarum 54: 267–274. doi:10.1111/j.1399-3054.1982.tb00258.x. 
  3. "Purification and characterization of a rotenone-insensitive NADH:Q6 oxidoreductase from mitochondria of Saccharomyces cerevisiae". European Journal of Biochemistry 176 (2): 377–84. September 1988. doi:10.1111/j.1432-1033.1988.tb14292.x. PMID 3138118. 
  4. "A single external enzyme confers alternative NADH:ubiquinone oxidoreductase activity in Yarrowia lipolytica". Journal of Cell Science 112 ( Pt 14) (14): 2347–54. July 1999. PMID 10381390. 
  5. "Alternative NAD(P)H dehydrogenases of plant mitochondria". Annual Review of Plant Biology 55: 23–39. 2004. doi:10.1146/annurev.arplant.55.031903.141720. PMID 15725055. 
  6. Yusnita, Yakob; Norsiah, Md Desa; Rahman, A. Jamal (2010-12-01). "Mutations in mitochondrial NADH dehydrogenase subunit 1 (mtND1) gene in colorectal carcinoma". The Malaysian Journal of Pathology 32 (2): 103–110. ISSN 0126-8635. PMID 21329181. 
  7. Alberts, Bruce; Johnson, Alexander; Lewis, Julian; Raff, Martin; Roberts, Keith; Walter, Peter (2002-01-01) (in en). Electron-Transport Chains and Their Proton Pumps. https://www.ncbi.nlm.nih.gov/books/NBK26904/. 

Further reading

External links