Biology:Rhodopirellula

From HandWiki

Rhodopirellula is a genus of marine bacteria from the family Pirellulaceae.[1][2][3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
Rhodopirellula

R. baltica

R. bahusiensis

R. europaea

R. lusitana

R. pilleata

R. heiligendammensis

R. solitaria

R. aestuarii

R. rubra

Rhodopirellula s.s.
Neorhodopirellula
Allorhodopirellula
Aporhodopirellula
Rhodopirellula

"R. islandica" Kizina et al. 2015

R. bahusiensis Frank 2023

R. baltica Schlesner et al. 2004

R. europaea Frank 2023[3]

R. lusitana Bondoso et al. 2014

R. pilleata Kallscheuer et al. 2021

R. heiligendammensis Kallscheuer et al. 2021

R. solitaria Kallscheuer et al. 2021

R. aestuarii Rosado-Vitorino et al. 2023

R. rubra Bondoso et al. 2014

"R. sallentina" Frank 2011

Rhodopirellula s.s.
Neorhodopirellula
Allorhodopirellula
Aporhodopirellula

Species incertae sedis:

  • "R. clava" Frank 2011
  • "R. flandrensis" Frank 2011
  • "R. gimesia" Frank 2011
  • "R. halodulae" Sreya et al. 2024
  • "R. magna" Frank 2011
  • "R. philippinensis" Frank 2011
  • "R. syltensis" Frank 2011

References

  1. 1.0 1.1 A.C. Parte. "Rhodopirellula". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/Rhodopirellula. 
  2. Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (1 January 2003). "Taxonomic Abstract for the genera." (in en). The NamesforLife Abstracts. doi:10.1601/tx.8812. 
  3. 3.0 3.1 (in en) Rhodopirellula. https://www.uniprot.org/taxonomy/265488. 
  4. Žure, Marina; Munn, Colin B.; Harder, Jens; Millard, Andrew (September 2015). "Diversity of Rhodopirellula and related planctomycetes in a North Sea coastal sediment employing carB as molecular marker". FEMS Microbiology Letters 362 (17). doi:10.1093/femsle/fnv127. 
  5. Sayers. "Rhodopirellula". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=265488&lvl=3&keep=1&srchmode=1&unlock. 
  6. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q21214596 entry