Biology:Tepidibacter

From HandWiki

Tepidibacter is a genus of Gram-positive bacteria in the family Clostridiaceae.[1]

The type species of this genus is Tepidibacter thalassicus, a moderately thermophilic bacterial species isolated from deep-sea hydrothermal vents.[2] Additional species within this genus have been identified.[3][4]


Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[5] and National Center for Biotechnology Information (NCBI)[6]

16S rRNA based LTP_10_2024[7][8][9] 120 marker proteins based GTDB 09-RS220[10][11][12]
Tepidibacter
 

T. formicigenes Urios et al. 2004

 
 
 

T. thalassicus Slobodkin et al. 2003

 
 
 

T. hydrothermalis Dai et al. 2023

 
 

T. mesophilus Tan et al. 2012

 
 
 
 
Tepidibacter
 

T. mesophilus

 
 
 

T. formicigenes

 
 

T. thalassicus

 
 
 

References

  1. ↑ Slobodkin, Alexander (2015). "Tepidibacter" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–4. doi:10.1002/9781118960608.gbm00669. ISBN 9781118960608. 
  2. ↑ Slobodkin, A. I. (1 July 2003). "Tepidibacter thalassicus gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, fermentative bacterium from a deep-sea hydrothermal vent". International Journal of Systematic and Evolutionary Microbiology 53 (4): 1131–1134. doi:10.1099/ijs.0.02600-0. PMID 12892139. 
  3. ↑ Urios, L. (1 March 2004). "Tepidibacter formicigenes sp. nov., a novel spore-forming bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent". International Journal of Systematic and Evolutionary Microbiology 54 (2): 439–443. doi:10.1099/ijs.0.02836-0. PMID 15023956. 
  4. ↑ Tan, H.-Q.; Wu, X.-Y.; Zhang, X.-Q.; Wu, M.; Zhu, X.-F. (18 February 2011). "Tepidibacter mesophilus sp. nov., a mesophilic fermentative anaerobe isolated from soil polluted by crude oil, and emended description of the genus Tepidibacter". International Journal of Systematic and Evolutionary Microbiology 62 (1): 66–70. doi:10.1099/ijs.0.027409-0. PMID 21335504. 
  5. ↑ A.C. Parte. "Tepidibacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/tepidibacter. 
  6. ↑ Sayers. "Tepidibacter". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=214904&lvl=3&keep=1&srchmode=1&unlock. 
  7. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  8. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  9. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  10. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  11. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  12. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q3984181 entry



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