Chemistry:ANRORC mechanism
The ANRORC mechanism in organic chemistry describes a special type of substitution reaction. ANRORC stands for Addition of the Nucleophile, Ring Opening, and Ring Closure in nucleophilic attack on ring systems[1][2][3] and it helps to explain product formation and distribution in some nucleophilic substitutions especially in heterocyclic compounds. It is widely used in medicinal chemistry.[4]
This reaction mechanism has been extensively studied in reactions of metal amide nucleophiles (such as sodium amide) and substituted pyrimidines (for instance 4-phenyl-6-bromopyrimidine 1) in ammonia at low temperatures. The main reaction product is 4-phenyl-6-aminopyrimidine 2 with the bromine substituent replaced by an amine. This rules out the formation of an aryne intermediate A which would also give the 5-substituted isomer.
The exclusion of a second intermediate in this reaction, the Meisenheimer complex B in favor of the ring-opened ANRORC intermediate is based on several pieces of evidence. With other amines such as piperidine the ring-opened compound after loss of hydrogen bromide to the nitrile is also the isolated reaction product:
More evidence is gained by isotope labeling with deuterium at C5:
The deuterium atom is no longer present in the reaction product and this is again explained by the ANRORC mechanism where the ring-opened intermediate 4 is a tautomeric pair enabling fast H-D exchange:
The final piece of evidence is provided by an isotope scrambling experiment with both nitrogen atoms in the pyrimidine core replaced by the 14N isotope to a degree of 3% each:
In the final product 4 (reversed to the reactant, after acid hydrolysis and bromination of 2) roughly half the isotope content is lost, clearly demonstrating that one internal nitrogen atom has been displaced to an external nitrogen atom.
The Zincke reaction is a named reaction involving an ANRORC mechanism.
References
- ↑ van Der Plas, Henk C. (1978). "The SN(ANRORC) mechanism: a new mechanism for nucleophilic substitution". Accounts of Chemical Research 11 (12): 462–468. doi:10.1021/ar50132a005.
- ↑ van Der Plas, Henk C. (1999). "SN(ANRORC) Reactions in Azines, Containing an "Outside" Leaving Group". in Katritzky, Alan R.. Degenerate Ring Transformations of Heterocyclic Compounds. Advances in Heterocyclic Chemistry. 74. Academic Press. pp. 9–86. doi:10.1016/S0065-2725(08)60809-0. ISBN 978-0-12-020774-9.
- ↑ van Der Plas, Henk C. (1999). "SN(ANRORC) Reactions in Azaheterocycles Containing an "Inside" Leaving Group". in Katritzky, Alan R.. Degenerate Ring Transformations of Heterocyclic Compounds. Advances in Heterocyclic Chemistry. 74. Academic Press. pp. 87–151. doi:10.1016/S0065-2725(08)60810-7. ISBN 978-0-12-020774-9.
- ↑ Roughley, Stephen D.; Jordan, Allan M. (2011). "The Medicinal Chemist's Toolbox: An Analysis of Reactions Used in the Pursuit of Drug Candidates". Journal of Medicinal Chemistry 54 (10): 3451–3479. doi:10.1021/jm200187y. PMID 21504168.
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