Biology:Formose reaction

Short description: Chemical reaction involving the formation of sugars from formaldehyde

The formose reaction, discovered by Aleksandr Butlerov in 1861, and hence also known as the Butlerov reaction, involves the formation of sugars from formaldehyde. The term formose is a portmanteau of formaldehyde and aldose.

Reaction and mechanism

The reaction is catalyzed by a base and a divalent metal such as calcium. The intermediary steps taking place are aldol reactions, reverse aldol reactions, and aldose-ketose isomerizations. Intermediates are glycolaldehyde, glyceraldehyde, dihydroxyacetone, and tetrose sugars. In 1959, Breslow proposed a mechanism for the reaction, consisting of the following steps:

Another depiction of the Breslow catalytic cycle for formaldehyde dimerization and C2-C6 saccharide formation.

The reaction exhibits an induction period, during which only the nonproductive Cannizzaro disproportionation of formaldehyde (to methanol and formate) occurs. The initial dimerization of formaldehyde to give glycolaldehyde (1) occurs via an unknown mechanism, possibly promoted by light or through a free radical process and is very slow. However, the reaction is autocatalytic: 1 catalyzes the condensation of two molecules of formaldehyde to produce an additional molecule of 1. Hence, even a trace (as low as 3 ppm) of glycolaldehyde is enough to initiate the reaction. The autocatalytic cycle begins with the aldol reaction of 1 with formaldehyde to make glyceraldehyde (2). An aldose-ketose isomerization of 2 forms dihydroxyacetone (3). A further aldol reaction of 3 with formaldehyde produces tetrulose (6), which undergoes another ketose-aldose isomerization to form aldotetrose 7 (either threose or erythrose). The retro-aldol reaction of 7 generates two molecules of 1, resulting in the net production of a molecule of 1 from two molecules of formaldehyde, catalyzed by 1 itself (autocatalysis). During this process, 3 can also react with 1 to form ribulose (4), which can isomerize to give rise to ribose (5), an important building block of ribonucleic acid.

The aldose-ketose isomerization steps are promoted by chelation to calcium. However, these steps have been shown to proceed through a hydride shift mechanism by isotope labeling studies, instead of via an intermediate enediolate, as previously proposed.

Significance

The formose reaction is of importance to the question of the origin of life, as it leads from simple formaldehyde to complex sugars like ribose, a building block of RNA. In one experiment simulating early Earth conditions, pentoses formed from mixtures of formaldehyde, glyceraldehyde, and borate minerals such as colemanite (Ca₂B₆O₁₁5H₂O) or kernite (Na₂B₄O₇). However, issues remain with both the thermodynamic and kinetic feasibility of binding pre-made sugars to a pre-made nucleobase, as well as a method to selectively employ ribose from the mixture. Both formaldehyde and glycolaldehyde have been observed spectroscopically in outer space, making the formose reaction of particular interest to the field of astrobiology. It must be carefully controlled, otherwise the alkaline conditions will cause the aldoses to undergo the Cannizzaro reaction.