Biology:Thermosome
A thermosome is a group II chaperonin protein complex that functions in archaea. It is the homolog of eukaryotic CCT.[1] This group II chaperonin is an ATP-dependent chaperonin that is responsible for folding or refolding of incipient or denatured proteins.[2] A thermosome has two rings, each consisting of eight subunits, stacked together to form a cylindrical shape with a large cavity at the center.[2] The thermosome is also defined by its heterooligomeric nature. The complex consists of two subunits[dubious ] that alternate location within its two rings.[2]
Being a Group II chaperonin, the thermosome has a similar structure to group I chaperonins. The main difference, however, lies in the existence of a helical protrusion in the thermosome which composes of a built-in lid of the hydrophilic cavity.[2] Not only is thermosome ATP-dependent, but the mechanism in which thermosome shifts from open to close conformation is also temperature-dependent. The open conformation of the ATP-thermosome exists mainly at low temperatures.[3] Whereas, the closed conformation of the thermosome occurs when heating to physiological temperature.[3]
Similar to the GroEL chaperonins in bacteria, the thermosome shows negative cooperativity since the two rings of the thermosome show different affinities for the binding of ATP. However, unlike the GroEL system, the thermosome is less affected by the concentration of ATP. In the absence of ATP, the thermosome does not have a preference for the T-state over the R-state. There is, however, an inhibition for the loading of the second ring when ADP is bound to the first ring.[4]
The N-terminus and C-terminus of thermosomes are arranged in an anti-parallel fashion and their interactions form part of the intra-ring interactions. Both the N-terminus and C-terminus of the thermosome have charged residues which interact with each other to contribute to the thermal stability of the thermosome. The cpn-α and cpn-β thermosomes specifically show maximum thermal stability in the pH range of 7.0 to 8.0 because this is the range where the charged N- and C-termini residues have net charges close to zero. Under lower or high pH conditions, these residues are charged and repelled each other which negatively affect thermal stability. This shows one possible way in which pH affects the stability of the thermosome.[5]
External links
- thermosome at the US National Library of Medicine Medical Subject Headings (MeSH)
References
- ↑ Ditzel L, Löwe J; Stock D; Stetter K; Huber H; Huber R; Steinbacher S (1998). "Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT". Cell 93 (1): 125–38. doi:10.1016/S0092-8674(00)81152-6. PMID 9546398.
- ↑ 2.0 2.1 2.2 2.3 Klumpp, M.; Baumeister, W. (1998-06-23). "The thermosome: archetype of group II chaperonins". FEBS Letters 430 (1–2): 73–77. doi:10.1016/s0014-5793(98)00541-9. ISSN 0014-5793. PMID 9678597.
- ↑ 3.0 3.1 Gutsche, I.; Holzinger, J.; Rauh, N.; Baumeister, W.; May, R. P. (August 2001). "ATP-induced structural change of the thermosome is temperature-dependent". Journal of Structural Biology 135 (2): 139–146. doi:10.1006/jsbi.2001.4373. ISSN 1047-8477. PMID 11580263.
- ↑ Bigotti, Maria Giulia; Clarke, Anthony R. (2005). "Cooperativity in the Thermosome". Journal of Molecular Biology 348 (1): 13–26. doi:10.1016/j.jmb.2005.01.066. ISSN 0022-2836. PMID 15808850. http://dx.doi.org/10.1016/j.jmb.2005.01.066.
- ↑ Zhang, Kai; Wang, Li; Liu, Yanxin; Chan, Kwok-Yan; Pang, Xiaoyun; Schulten, Klaus; Dong, Zhiyang; Sun, Fei (2013-05-25). "Flexible interwoven termini determine the thermal stability of thermosomes". Protein & Cell 4 (6): 432–444. doi:10.1007/s13238-013-3026-9. ISSN 1674-800X. PMID 23709365. PMC 3740188. http://dx.doi.org/10.1007/s13238-013-3026-9.
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