Generalized linear array model

In statistics, the generalized linear array model (GLAM) is used for analyzing data sets with array structures. It based on the generalized linear model with the design matrix written as a Kronecker product.

Overview

The generalized linear array model or GLAM was introduced in 2006. Such models provide a structure and a computational procedure for fitting generalized linear models or GLMs whose model matrix can be written as a Kronecker product and whose data can be written as an array. In a large GLM, the GLAM approach gives very substantial savings in both storage and computational time over the usual GLM algorithm.

Suppose that the data [math]\displaystyle{ \mathbf Y }[/math] is arranged in a [math]\displaystyle{ d }[/math]-dimensional array with size [math]\displaystyle{ n_1\times n_2\times\dots\times n_d }[/math]; thus, the corresponding data vector [math]\displaystyle{ \mathbf y = \operatorname{vec}(\mathbf Y) }[/math] has size [math]\displaystyle{ n_1n_2n_3\cdots n_d }[/math]. Suppose also that the design matrix is of the form

[math]\displaystyle{ \mathbf X = \mathbf X_d\otimes\mathbf X_{d-1}\otimes\dots\otimes\mathbf X_1. }[/math]

The standard analysis of a GLM with data vector [math]\displaystyle{ \mathbf y }[/math] and design matrix [math]\displaystyle{ \mathbf X }[/math] proceeds by repeated evaluation of the scoring algorithm

[math]\displaystyle{ \mathbf X'\tilde{\mathbf W}_\delta\mathbf X\hat{\boldsymbol\theta} = \mathbf X'\tilde{\mathbf W}_\delta\tilde{\boldsymbol\theta} , }[/math]

where [math]\displaystyle{ \tilde{\boldsymbol\theta} }[/math] represents the approximate solution of [math]\displaystyle{ \boldsymbol\theta }[/math], and [math]\displaystyle{ \hat{\boldsymbol\theta} }[/math] is the improved value of it; [math]\displaystyle{ \mathbf W_\delta }[/math] is the diagonal weight matrix with elements

[math]\displaystyle{ w_{ii}^{-1} = \left(\frac{\partial\eta_i}{\partial\mu_i}\right)^2\mathrm{var}(y_i), }[/math]

and

[math]\displaystyle{ \mathbf z = \boldsymbol\eta + \mathbf W_\delta^{-1}(\mathbf y - \boldsymbol\mu) }[/math]

is the working variable.

Computationally, GLAM provides array algorithms to calculate the linear predictor,

[math]\displaystyle{ \boldsymbol\eta = \mathbf X \boldsymbol\theta }[/math]

and the weighted inner product

[math]\displaystyle{ \mathbf X'\tilde{\mathbf W}_\delta\mathbf X }[/math]

without evaluation of the model matrix [math]\displaystyle{ \mathbf X . }[/math]

Example

In 2 dimensions, let [math]\displaystyle{ \mathbf X = \mathbf X_2\otimes\mathbf X_1 }[/math], then the linear predictor is written [math]\displaystyle{ \mathbf X_1 \boldsymbol\Theta \mathbf X_2' }[/math] where [math]\displaystyle{ \boldsymbol\Theta }[/math] is the matrix of coefficients; the weighted inner product is obtained from [math]\displaystyle{ G(\mathbf X_1)' \mathbf W G(\mathbf X_2) }[/math] and [math]\displaystyle{ \mathbf W }[/math] is the matrix of weights; here [math]\displaystyle{ G(\mathbf M) }[/math] is the row tensor function of the [math]\displaystyle{ r \times c }[/math] matrix [math]\displaystyle{ \mathbf M }[/math] given by

[math]\displaystyle{ G(\mathbf M) = (\mathbf M \otimes \mathbf 1') \circ (\mathbf 1' \otimes \mathbf M) }[/math]

where [math]\displaystyle{ \circ }[/math] means element by element multiplication and [math]\displaystyle{ \mathbf 1 }[/math] is a vector of 1's of length [math]\displaystyle{ c }[/math].

On the other hand, the row tensor function [math]\displaystyle{ G(\mathbf M) }[/math] of the [math]\displaystyle{ r \times c }[/math] matrix [math]\displaystyle{ \mathbf M }[/math] is the example of Face-splitting product of matrices, which was proposed by Vadym Slyusar in 1996:

[math]\displaystyle{ \mathbf{M} \bull \mathbf{M} = \left(\mathbf {M} \otimes \mathbf {1}^\textsf{T}\right) \circ \left(\mathbf {1}^\textsf{T} \otimes \mathbf {M}\right) , }[/math]

where [math]\displaystyle{ \bull }[/math] means Face-splitting product.

These low storage high speed formulae extend to [math]\displaystyle{ d }[/math]-dimensions.

Applications

GLAM is designed to be used in [math]\displaystyle{ d }[/math]-dimensional smoothing problems where the data are arranged in an array and the smoothing matrix is constructed as a Kronecker product of [math]\displaystyle{ d }[/math] one-dimensional smoothing matrices.