Physics:Screened Coulomb potentials implicit solvent model
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Short description: Continuum solvent model for biomolecular simulations
SCP-ISM, or screened Coulomb potentials implicit solvent model, is a continuum approximation of solvent effects for use in computer simulations of biological macromolecules, such as proteins and nucleic acids, usually within the framework of molecular dynamics.[1] It is based on the classic theory of polar liquids, as developed by Peter Debye and corrected by Lars Onsager to incorporate reaction field effects.[1] The model can be combined with quantum chemical calculations to formally derive a continuum model of solvent effects suitable for computer simulations of small and large molecular systems. The model is included in the CHARMM molecular mechanics code.[2]
References
- ↑ 1.0 1.1 Hassan, Sergio A.; Guarnieri, Frank; Mehler, Ernest L. (2000-07-01). "A General Treatment of Solvent Effects Based on Screened Coulomb Potentials" (in en). The Journal of Physical Chemistry B 104 (27): 6478–6489. doi:10.1021/jp993895e. ISSN 1520-6106. https://pubs.acs.org/doi/10.1021/jp993895e.
- ↑ "scpism (c48b2) | CHARMM". https://academiccharmm.org/documentation/version/c48b2/scpism.
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