Biology:Global Biodata Coalition
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The Global Biodata Coalition is an organization promoting biocuration and fostering support of research funders for the sustainability of biological data resources.[1][2][3]
Global Core Biodata Resources (GCBRs)
The organization maintains a list of resources, representing "critical components for ensuring the reproducibility and integrity of life sciences research."[4]
As of 2023, the list includes the following organizations: [5]
- Alliance of Genome Resources
- BacDive
- BAR: Bio-Analytic Resource for Plant Biology
- Bgee
- BRENDA
- Catalogue of Life (COL)
- CATH database
- Cellosaurus
- ChEBI
- ChEMBL
- CIViC: Clinical Interpretation of Variants in Cancer
- Clinical Genome Resource (ClinGen)
- DNA Data Bank of Japan (DDBJ Center)
- EcoCyc
- Ensembl
- Europe PMC
- European Nucleotide Archive (ENA)
- FlyBase
- GENCODE
- Gene Ontology (GO)
- Global Biodiversity Information Facility (GBIF)
- Genome Aggregation Database (gnomAD)
- Genome Sequence Archive (GSA)
- NHGRI-EBI Catalog of human genome-wide association studies (GWAS Catalog)
- Gene Expression Database (GXD)
- HGNC: HUGO Gene Nomenclature Committee
- Human Disease Ontology Knowledgebase (DO-KB)
- Human Protein Atlas
- IMEx: International Molecular Exchange Consortium
- InterPro
- IUPHAR/BPS Guide to PHARMACOLOGY
- LIPID MAPS
- LPSN: List of Prokaryotic names with Standing in Nomenclature
- MGD: Mouse Genome Database
- Orphadata Science
- PANTHER
- PharmGKB: Pharmacogenomics Knowledgebase
- Planteome (including the Plant Ontology)
- PomBase
- Protein Data Bank (PDB)
- ProteomeXchange Consortium
- Rat Genome Database (RGD)
- Reactome
- Rhea
- Saccharomyces Genome Database (SGD)
- SILVA
- STRING
- UCSC Genome Browser
- UniProt
- VEuPathDB
- WormBase
- ZFIN: The Zebrafish Information Network
References
- ↑ Cook, Chuck; Cochrane, Guy (2023-09-08). "The Global Biodata Coalition: Towards a sustainable biodata infrastructure". Biodiversity Information Science and Standards 7. doi:10.3897/biss.7.112303. ISSN 2535-0897. https://biss.pensoft.net/article/112303/.
- ↑ "Global Biodata Coalition: White Paper on Open Data Strategies" (in en). 2023-11-27. https://www.rd-alliance.org/global-biodata-coalition-white-paper-open-data-strategies.
- ↑ "Global Biodata Coalition coordinates worldwide funding of data resources" (in en). https://www.genome.gov/about-nhgri/Director/genomics-landscape/august-4-2022-global-biodata-coalition-coordinates-worldwide-funding-of-data-resources.
- ↑ "GBIF named a Global Core Biodata Resource" (in en). https://www.gbif.org/news/6PHdgoyIF6RmI7u4VOouuD/gbif-named-a-global-core-biodata-resource.
- ↑ "List of Current Global Core Biodata Resources" (in en-US). https://globalbiodata.org/what-we-do/global-core-biodata-resources/list-of-current-global-core-biodata-resources/.
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