Biology:Haloterrigena

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Short description: Genus of archaea

Haloterrigena
Scientific classification
Domain:
Archaea
Kingdom:
Euryarchaeota
Phylum:
Euryarchaeota
Class:
Halobacteria
Order:
Natrialbales
Family:
Natrialbaceae
Genus:
Haloterrigena

Ventosa et al. 1999[1]
Type species
Haloterrigena turkmenica
(Zvyagintseva & Tarasov 1989) Ventosa et al. 1999
Species
  • H. alkaliphila
  • "H. gelatinilytica"
  • H. salfodinae
  • H. salina
  • H. turkmenica

Haloterrigena (common abbreviation Htg.) is a genus of the Natrialbaceae.[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2]

16S rRNA based LTP_06_2022[3][4][5] 53 marker proteins based GTDB 08-RS214[6][7][8]
Haloterrigena
 
 

H. alkaliphila

 
 

H. turkmenica

 
 
 
 

H. salifodinae

 
 

H. salina

 
 
 
Haloterrigena
 
 

H. alkaliphila Bao et al. 2022

 
 

H. turkmenica (Zvyagintseva & Tarasov 1989) Ventosa et al. 1999

 
 
 
 

"H. gelatinilytica" Liu et al. 2022

 
 
 

H. salifodinae Chen et al. 2020

 
 

H. salina Gutiérrez et al. 2008

 
 
 
 

Taxonomy

Species formerly placed in this taxon[1]

H. jeotgali is proposed to be a synonym of Natrinema thermotolerans,[9] but as of 2022, is still considered a valid name.[10]

References

  1. ↑ 1.0 1.1 1.2 J.P. Euzéby. "Haloterrigena". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/haloterrigena. 
  2. ↑ 2.0 2.1 Sayers. "Haloterrigena". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=121871&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  3. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  4. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree. 
  5. ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf. 
  6. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  7. ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree. 
  8. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 
  9. ↑ de la Haba, Rafael; Minegishi, Hiroaki; Kamekura, Masahiro; Shimane, Yasuhiro; Ventosa, Antonio (2021). "Phylogenomics of Haloarchaea: The Controversy of the Genera Natrinema-Haloterrigena". Frontiers in Microbiology 12: 740909. doi:10.3389/fmicb.2021.740909. PMID 34690986. 
  10. ↑ Page Species: Haloterrigena jeotgali on "LPSN - List of Prokaryotic names with Standing in Nomenclature". Deutsche Sammlung von Mikroorganismen und Zellkulturen. https://lpsn.dsmz.de/species/haloterrigena-jeotgali. 

Further reading

Scientific journals

  • Tindall, BJ (2003). "Taxonomic problems arising in the genera Haloterrigena and Natrinema". Int. J. Syst. Evol. Microbiol. 53 (Pt 5): 1697–1698. Published online 28 February 2003. doi:10.1099/ijs.0.02529-0. PMID 13130070. 
  • "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. 2000. doi:10.1099/00207713-50-3-1405. PMID 10843089. 
  • "Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov". Int. J. Syst. Bacteriol. 49: 131–136. 1999. doi:10.1099/00207713-49-1-131. PMID 10028254. 

Scientific books

  • Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". in RE Buchanan. Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.. 

Scientific databases

External links

Wikidata ☰ Q5643466 entry




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