Biology:Methanohalophilus
From HandWiki
Short description: Genus of archaea
| Methanohalophilus | |
|---|---|
| |
| Scientific classification | |
| Domain: | |
| Kingdom: | |
| Phylum: | |
| Class: | |
| Order: | |
| Family: | |
| Genus: | Methanohalophilus Paterek and Smith 1988
|
| Type species | |
| Methanohalophilus mahii Paterek & Smith 1988
| |
| Species | |
| |
In taxonomy, Methanohalophilus is a genus of the Methanosarcinaceae.[1]
The species are strictly anaerobic and live solely through the production of methane, using methyl compounds as substrates. The genus Methanohalophilus contains three moderately halophilic species, Methanohalophilus mahii isolated from Utah's Great Salt Lake in the United States , Methanohalophilus halophilus isolated from Shark Bay in Australia , and Methanohalophilus portucalensis isolated from a salt pan in Portugal.[2] It also contains Methanohalophilus oregonese, which is alkaliphilic.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[1]
| 16S rRNA based LTP_06_2022[5][6][7] | 53 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
See also
References
- ↑ 1.0 1.1 Sayers. "Methanohalophilus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2175&lvl=3&keep=1&srchmode=1&unlock.
- ↑ Extremophiles Handbook. Springer Science and Business Media. 8 December 2010. p. 260. ISBN 978-4431538974. https://books.google.com/books?id=t_EgsgIY-_AC&q=genus+Methanohalobium&pg=PA260. Retrieved 2016-08-08.
- ↑ The Prokaryotes. 3. Springer Science and Business Media. 2006-02-10. p. 246. ISBN 0387254935. https://books.google.com/books?id=swciHNNWZDEC&q=genus+Methanohalobium&pg=PA246. Retrieved 2016-08-08.
- ↑ J.P. Euzéby. "Methanohalophilus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/methanohalophilus.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree.
- ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf.
- ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
Scientific journals
- Katayama, Taiki; Yoshioka, Hideyoshi; Mochimaru, Hanako (2014). "Methanohalophilus levihalophilus sp. nov., a slightly halophilic, methylotrophic methanogen isolated from natural gas-bearing deep aquifers, and emended description of the genus Methanohalophilus". International Journal of Systematic and Evolutionary Microbiology 64 (Pt 6): 2089–93. doi:10.1099/ijs.0.063677-0. PMID 24670897.
- Springer E; Sachs MS; Woese CR; Boone DR (1995). "Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae". International Journal of Systematic Bacteriology 45 (3): 554–559. doi:10.1099/00207713-45-3-554. PMID 8590683.
- Paterek JR; Smith PH (1988). "Methanohalophilus mahii gen. nov., sp. nov., a methylotrophic halophilic methanogen". International Journal of Systematic Bacteriology 38: 122–123. doi:10.1099/00207713-38-1-122.
- Sowers KR; Johnson JL; Ferry JG (1984). "Phylogenic relationships among the methylotrophic methane-producing bacteria and emendation of the family Methanosarcinaceae". International Journal of Systematic Bacteriology 34 (4): 444–450. doi:10.1099/00207713-34-4-444.
- Balch WE; Fox GE; Magrum LJ; Woses CR et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMID 390357.
- Buchanan, RE (1960). "Chemical terminology and microbiological nomenclature". International Bulletin of Bacteriological Nomenclature and Taxonomy 10: 16–22. doi:10.1099/0096266X-10-1-16.
- Spring S et al. (2010). "The genome sequence of Methanohalophilus mahii SLP(T) reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments". Archaea 2010: 690737. doi:10.1155/2010/690737. PMID 21234345.
Scientific books
- Boone, DR (2001). "Genus IV. Methanohalophilus Paterek and Smith 1988, 122VP". in DR Boone. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. ISBN 978-0-387-98771-2. https://archive.org/details/bergeysmanualofs00boon.
Scientific databases
- PubMed references for Methanohalophilus
- PubMed Central references for Methanohalophilus
- Google Scholar references for Methanohalophilus
External links
- NCBI taxonomy page for Methanohalophilus
- Search Tree of Life taxonomy pages for Methanohalophilus
- Search Species2000 page for Methanohalophilus
- MicrobeWiki page for Methanohalophilus
- LPSN page for Methanohalophilus
- Type strain of Methanohalophilus portucalensis at BacDive - the Bacterial Diversity Metadatabase
Wikidata ☰ Q4044121 entry
 |  |
