Chemistry:Nocuolin A

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Nocuolin A
Names
IUPAC name
1-(4,6-dipentyl-5,6-dihydrooxadiazin-2-yl)-3-hydroxypropan-1-one
Identifiers
3D model (JSmol)
ChEBI
ChemSpider
Properties
C16H30N2O3
Molar mass 298.4270 g/mol
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).
Infobox references

Nocuolin A is a secondary metabolite derived from the cyanobacterium Nostoc sp., Nodularia sp., and Anabaena sp.[1][2] This secondary metabolite is produced by enzymes of the noc biosynthetic gene group. Also, exhibits anticancer activity that may alter mitochondrial oxidative phosphorylation, thereby inducing antiproliferative effects and apoptosis. Its structure contains a 3-hydroxypropanoyl group, two alkyl chains, and a 1,2,3-oxadiazine core[3]

History

In 2017, Nocuolin A was isolated from the cyanobacterium strains Nostoc sp. CCAP 1453/38.[2] Nocuolin A was purified using hydrophobic and high-performance countercurrent chromatography (HPCC) and semipreparative HPLC.[2] Nocuolin A is notable for its antiproliferative, antifouling, anti-amoebic, antiparasitic, and anthelmintic activity.[2][4][5] Its antiproliferative activity against tumor cells has an IC50 between 0.72 and 4.5 µM.[2] Its antifouling activity inhibits marine organisms such as Mytilus galloprovincialis, preventing them from adhering to surfaces. It can also cause cell death in diatoms such as Navicula sp.[4] The anti-amoebic activity of Nocuolin A induces encystment in Acanthamoeba castellanii (IC50: ~1.7 µM) and Dictyostelium discoideum (IC50: ~0.1 µM). Nocuolin A is effective against protozoa such as Trypanosoma brucei (IC50 = 3.99 µM) and Leishmania infantum (IC50 = 0.21 µM). Finally, its anthelmintic activity results in an inhibition of nematode development.[5]

Mechanism of action

The primary mechanism of action of Nocuolin A is the inhibition of mitochondrial oxidative phosphorylation (OXPHOS), which leads to decreased ATP production, induces metabolic stress, activates autophagy, and produces BCL-2 family-independent apoptosis.[6][7] Nocuolin A also induces caspase-dependent apoptosis by activating caspase-3.[2]

Biosynthesis

Biosynthesis of Nocuolin A

The biosynthesis of Nocuolin A is a hybrid fatty acid-derived biosynthesis, constructed from hexanoic acid, octanoic acid, and L-methionine. The first step is the activation of NocH (hexanoic acid and octanoic acid), which, from acyl-AMP, produces acyl-ACP. Next, a carbon-carbon bond is formed between hexanoic acid and octanoic acid by the enzyme NocG (ketosynthase), producing a C13 β-keto acid. A spontaneous decarboxylation then occurs, resulting in the loss of CO2 and the formation of a ketone intermediate. L-methionine interacts with the nitrogen to form 3-hydroxypropanoyl, and from this product, an oxadiazine ring is formed. Finally, Nocuolin A is produced and a chiral center was discovered in the structure whose absolute configuration is currently unknown.[3]

In vitro studies

In vitro studies have been conducted using cell models such as HCTII6 for colon cancer, MCF7 for breast cancer, and hTERT RPE-1, which are immortalized normal epithelial cells, to demonstrate their mechanism of action in OXPHOS inhibition.[6][7] In vitro studies have also been performed using HeLa cells from cervical cancer, the A549 cell line from lung cancer, U251 and U87 glioma cells, and OVCAR5 ovarian cancer cells, demonstrating the mechanism of action of caspase-dependent apoptosis.[2]

References

  1. "Natural Products Atlas | Compounds" (in en). https://www.npatlas.org/explore/compounds/NPA027423. 
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Voráčová, Kateřina; Hájek, Jan; Mareš, Jan; Urajová, Petra; Kuzma, Marek; Cheel, José; Villunger, Andreas; Kapuscik, Alexandra et al. (2017-03-02). "The cyanobacterial metabolite nocuolin a is a natural oxadiazine that triggers apoptosis in human cancer cells" (in en). PLOS ONE 12 (3). doi:10.1371/journal.pone.0172850. ISSN 1932-6203. PMID 28253280. Bibcode2017PLoSO..1272850V. 
  3. 3.0 3.1 Martins, Teresa P.; Glasser, Nathaniel R.; Kountz, Duncan J.; Oliveira, Paulo; Balskus, Emily P.; Leão, Pedro N. (2022-09-16). "Biosynthesis of the Unusual Carbon Skeleton of Nocuolin A". ACS Chemical Biology 17 (9): 2528–2537. doi:10.1021/acschembio.2c00464. ISSN 1554-8929. PMID 36044983. 
  4. 4.0 4.1 Pereira, Sandra; Oliveira, Isabel B.; Sousa, Maria Lígia; Gonçalves, Catarina; Preto, Marco; Turkina, Maria V.; Vasconcelos, Vitor; Campos, Alexandre et al. (2024-10-01). "Antifouling activity and ecotoxicological profile of the cyanobacterial oxadiazine nocuolin A". Chemosphere 365. doi:10.1016/j.chemosphere.2024.143318. ISSN 0045-6535. PMID 39271082. Bibcode2024Chmsp.36543318P. https://www.sciencedirect.com/science/article/pii/S0045653524022161. 
  5. 5.0 5.1 Vieira, Ana R.; Camacho, Francisco; Sousa, Maria L.; Luelmo, Sara; Santarém, Nuno; Cordeiro-da-Silva, Anabela; Leão, Pedro N. (2025-03-04). "The Cyanobacterial Oxadiazine Nocuolin A Shows Broad-Spectrum Toxicity Against Protozoans and the Nematode C. elegans" (in en). Microbial Ecology 88 (1): 9. doi:10.1007/s00248-025-02507-2. ISSN 1432-184X. PMID 40035794. Bibcode2025MicEc..88....9V. 
  6. 6.0 6.1 Sousa, Maria Lígia; Preto, Marco; Vasconcelos, Vítor; Linder, Stig; Urbatzka, Ralph (2019-04-03). "Antiproliferative Effects of the Natural Oxadiazine Nocuolin A Are Associated With Impairment of Mitochondrial Oxidative Phosphorylation" (in English). Frontiers in Oncology 9. doi:10.3389/fonc.2019.00224. ISSN 2234-943X. PMID 31001482. 
  7. 7.0 7.1 Dyshlovoy, Sergey A. (2020-09-21). "Blue-Print Autophagy in 2020: A Critical Review". Marine Drugs 18 (9): 482. doi:10.3390/md18090482. ISSN 1660-3397. PMID 32967369.