Biology:Astrovirology
Astrovirology is an emerging subdiscipline of astrobiology which aims to understand what role viruses played in the origin and evolution of life on Earth as well as the potential for viruses beyond Earth.
Viruses and early life on Earth
Viruses drive evolution
Viruses are a major driving force in evolution; the arms race between viruses and their host, or the Red Queen hypothesis, causes strong evolutionary pressures in both the host and viruses.[1] The host evolves to evade and destroy viruses, while the virus evolves mechanisms to continue infecting the host. Evolution is also influenced by viral horizontal gene transfer. Viral genes can be inserted into the host genome (ex. Retroviruses) and sometimes these genes are evolutionarily favorable. One common example of beneficial horizontal gene transfer in humans is the gene for syncytin, which came from ancient viruses and is important in placenta development.
Viruses influence major evolutionary events
Though unproven, some virologists posit that viruses may have played an important role in major evolutionary events, including the emergence of a DNA genome from an RNA world, divergence from LUCA to the three domains of life, archaea, bacteria, and eukarya, and development of multicellularity.[1] Emergence of a DNA genome and divergence from LUCA may have been aided by horizontal gene transfer of polymerases and other gene-editing enzymes from viruses. Meanwhile, viral selection pressures could have also aided divergence from LUCA to defend against different viruses, while multicellularity provides greater cell population protection from viruses.[1]
Viruses and Earth's environment
Viruses influence biogeochemical cycles
Viruses cause nutrient cycling in the ocean via the viral shunt, and up to 25% of the available carbon in the upper ocean is attributed to virus-induced cell lysis.[1]
Around 5% of Earth's oxygen is thought to be produced by cells infected by viruses encoding photosynthetic genes otherwise absent from the cell.[1] For example, some viruses of cyanobacteria contain genes for Photosystem II, which allows those cyanobacteria to photosynthesize and live in a different part of the ocean as their non-infected counterparts. Some viruses encode other metabolic genes that allow new metabolic functions in their host, for example, phosphate, carbon, and sulfur metabolism.
Extremophile viruses
Viruses have been found in extremely hot, cold, and acidic natural environments, up to 93 °C (199 °F), down to −12 °C (10 °F), and down to pH 1.5.[2]
Viruses in space
Infectivity in space
Viruses including tobacco mosaic virus, poliovirus, and bacteriophage T1 have maintained infectivity after being exposed to space-like conditions including interstellar radiation, low temperature, and low pressure.[1] Further studies are needed to assess the risk of viral hitchhikers, but any virus infecting an organism inside a habitable spacecraft can survive as long as that organism survives.
Effect on astronauts
Latent viruses such as herpes virus, prevalent in humans, can become reactive during spaceflight due to spaceflight stressors. While astronauts experienced few if any symptoms, the potential for other viruses to become reactivated or more virulent is a substantial threat.[3]
Furthermore, some bacteria (Serratia marcescens) have been found to be more virulent in spaceflight conditions, leading to a question of whether viruses could also become more virulent.[4]
Forward contamination potential
Limiting forward contamination is critical to be confident in the results of life detection efforts. Bacteria pose a significant contamination challenge in spacecraft assembly clean rooms despite decontamination procedures.[5] However, viruses were found to be present at relatively low levels, based on a metagenomic analysis.[6] Another metagenomic study detected viable human viruses, including herpesvirus and cycloviruses.[7]
Back contamination potential
Life (and viruses) on other planetary bodies have two important potential origins: from Earth or from a second genesis (life originated on that planet). Ancient viruses could have been transported from Earth to another planetary body, perhaps following a massive meteorite impact or volcanic eruption.[1] If this occurred, these viruses would likely be very biological similar to modern organisms.[2] There may be minimal or no immunity among Earth life against the ancient virus, and whatever organism it can infect may be crippled by its re-introduction.
If extraterrestrial viruses are part of a second genesis, their infectivity of Earth life depends on how they encode their genetic information. While their encoding could be incompatible with Earth life, it is also possible that RNA, DNA, or similar molecules could encode for life in the second genesis. In this case, Earth life may be a suitable host.[2]
Potential biosignatures/detection methods
While viruses may or may not be "alive", detection of virions on another planet would be powerful indirect evidence for life.[1] The following methods could offer biosignatures with varying levels of usefulness:
- Scanning electron microscopy: SEM has potential to be integrated onto a spacecraft, but currently lacks the resolution to detect virion structure.[1]
- Transmission electron microscopy: TEM can visualize virion structure, but the imaging procedure is more difficult than SEM,[8] and so integration onto an automated spacecraft seems unlikely.[1]
- Lipid detection in rock: Enveloped viruses may be identifiable via this method.[1]
- Chemical identification: Specific chemicals can be identified via GC-MS, NMR, or FTIR spectroscopy.[1]
- Virus-mediated event: Large-scale lysis of a given host cell can cause easily detectable effects. For example, the chalk deposits in the white cliffs of Dover are caused by large-scale lysis of algae, which could have been virus-induced.[1]
Proposed and current life detection missions
Astrovirologists have called for proposed missions to sample the water plumes of Enceladus and/or Europa for viruses.[1] Others have called for virus detection as part of Mars rover missions like the Rosalind Franklin rover.[9] However, given the lack of validated biosignatures to detect viruses in situ, sample return to Earth has been recommended,[9] which would allow use of TEM and other detection methods requiring complex sample preparation and/or large equipment. The Mars 2020 Perseverance rover has equipment to drill regolith samples and store them for sample return on a future Mars mission.[10]
References
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 Berliner, Aaron J.; Mochizuki, Tomohiro; Stedman, Kenneth M. (2018-01-10). "Astrovirology: Viruses at Large in the Universe". Astrobiology 18 (2): 207–223. doi:10.1089/ast.2017.1649. ISSN 1531-1074. PMID 29319335. Bibcode: 2018AsBio..18..207B. https://www.liebertpub.com/doi/10.1089/ast.2017.1649.
- ↑ 2.0 2.1 2.2 Griffin, Dale Warren (August 2013). "The Quest for Extraterrestrial Life: What About the Viruses?". Astrobiology 13 (8): 774–783. doi:10.1089/ast.2012.0959. ISSN 1531-1074. PMID 23944293. Bibcode: 2013AsBio..13..774G. https://www.liebertpub.com/doi/pdf/10.1089/ast.2012.0959.
- ↑ Rooney, Bridgette V.; Crucian, Brian E.; Pierson, Duane L.; Laudenslager, Mark L.; Mehta, Satish K. (2019). "Herpes Virus Reactivation in Astronauts During Spaceflight and Its Application on Earth" (in English). Frontiers in Microbiology 10: 16. doi:10.3389/fmicb.2019.00016. ISSN 1664-302X. PMID 30792698.
- ↑ Gilbert, Rachel; Torres, Medaya; Clemens, Rachel; Hateley, Shannon; Hosamani, Ravikumar; Wade, William; Bhattacharya, Sharmila (2020-02-04). "Spaceflight and simulated microgravity conditions increase virulence of Serratia marcescens in the Drosophila melanogaster infection model" (in en). npj Microgravity 6 (1): 4. doi:10.1038/s41526-019-0091-2. ISSN 2373-8065. PMID 32047838. Bibcode: 2020npjMG...6....4G.
- ↑ van Heereveld, Luc; Merrison, Jonathan; Nørnberg, Per; Finster, Kai (June 2017). "Assessment of the Forward Contamination Risk of Mars by Clean Room Isolates from Space-Craft Assembly Facilities through Aeolian Transport - a Model Study". Origins of Life and Evolution of the Biosphere 47 (2): 203–214. doi:10.1007/s11084-016-9515-0. ISSN 1573-0875. PMID 27461254. Bibcode: 2017OLEB...47..203V. https://pubmed.ncbi.nlm.nih.gov/27461254/.
- ↑ Bashir, Mina; Ahmed, Mahjabeen; Weinmaier, Thomas; Ciobanu, Doina; Ivanova, Natalia; Pieber, Thomas R.; Vaishampayan, Parag A. (2016-09-09). "Functional Metagenomics of Spacecraft Assembly Cleanrooms: Presence of Virulence Factors Associated with Human Pathogens". Frontiers in Microbiology 7: 1321. doi:10.3389/fmicb.2016.01321. ISSN 1664-302X. PMID 27667984.
- ↑ Weinmaier, Thomas; Probst, Alexander J.; La Duc, Myron T.; Ciobanu, Doina; Cheng, Jan-Fang; Ivanova, Natalia; Rattei, Thomas; Vaishampayan, Parag (2015-12-08). "A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses". Microbiome 3: 62. doi:10.1186/s40168-015-0129-y. ISSN 2049-2618. PMID 26642878.
- ↑ "Electron Microscopy | TEM vs SEM - US" (in en). https://www.thermofisher.com/us/en/home/materials-science/learning-center/applications/sem-tem-difference.html#:~:text=The%20main%20difference%20between%20SEM,sample)%20to%20create%20an%20image..
- ↑ 9.0 9.1 Janjic, Aleksandar (2018-11-29). "The Need for Including Virus Detection Methods in Future Mars Missions". Astrobiology 18 (12): 1611–1614. doi:10.1089/ast.2018.1851. ISSN 1531-1074. Bibcode: 2018AsBio..18.1611J. https://www.liebertpub.com/doi/abs/10.1089/ast.2018.1851.
- ↑ mars.nasa.gov. "Sample Handling" (in en). https://mars.nasa.gov/mars2020/spacecraft/rover/sample-handling/.
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