Biology:Methanocorpusculaceae

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Short description: Family of archaea

Methanocorpusculaceae
Scientific classification
Domain:
Archaea
Kingdom:
Euryarchaeota
Phylum:
Euryarchaeota
Class:
Methanomicrobia
Order:
Methanomicrobiales
Family:
Methanocorpusculaceae

Zellner et al. 1989
Genus
Synonyms
  • Methanocalculaceae Zhilina et al. 2014

In taxonomy, the Methanocorpusculaceae are a family of microbes within the order Methanomicrobiales.[1] It contains exactly one genus, Methanocorpusculum. The species within Methanocorpusculum were first isolated from anaerobic digesters and anaerobic wastewater treatment plants. In the wild, they prefer freshwater environments. Unlike many other methanogenic archaea, they do not require high temperatures or extreme salt concentrations to live and grow.[2]

Nomenclature

The name Methanocorpusculaceae has Latin roots. Overall, it means family of bodies that produce methane.[3]

Description and metabolism

The cells within this species are coccoid, small and irregular. They are Gram-negatives and not very motile. They reduce carbon dioxide to methane using hydrogen, but they can also use formate and secondary alcohols. They cannot use acetate or methylamines. They grow most quickly at 30–40 °C.[3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_06_2022[5][6][7] 53 marker proteins based GTDB 08-RS214[8][9][10]
 
Methanocalculaceae

Methanocalculus

 
Methanocorpusculaceae

Methanocorpusculum

 
 
Methanocorpusculaceae
 

Methanocalculus

 
 

Methanocorpusculum

 
 

See also

References

  1. ↑ 1.0 1.1 Sayers. "Methanocorpusculaceae". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=88404&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  2. ↑ Oren, Aharon (19 October 2014). "The Family Methanocorpusculaceae". The Prokaryotes (Springer): 225–230. doi:10.1007/978-3-642-38954-2_314. ISBN 978-3-642-38953-5. 
  3. ↑ 3.0 3.1 Bergey's Manual of Systematic Bacteriology. 1 (1 ed.). 2001. pp. 262. doi:10.1007/978-0-387-21609-6. ISBN 978-1-4419-3159-7. https://books.google.com/books?id=3znhBwAAQBAJ&q=Bergey%27s+Methanocorpusculaceae&pg=PA262. Retrieved 2016-07-31. 
  4. ↑ J.P. Euzéby. "Methanocorpusculaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/family/methanocorpusculaceae. 
  5. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  6. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree. 
  7. ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf. 
  8. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  9. ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree. 
  10. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Scientific journals

  • Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928. 
  • Euzeby JP; Tindall BJ (2001). "Nomenclatural type of orders: corrections necessary according to Rules 15 and 21a of the Bacteriological Code (1990 Revision), and designation of appropriate nomenclatural types of classes and subclasses. Request for an Opinion". Int. J. Syst. Evol. Microbiol. 51 (Pt 2): 725–727. doi:10.1099/00207713-51-2-725. PMID 11321122. 
  • Rouviere P; Mandelco L; Winker S; Woese CR (1992). "A detailed phylogeny for the Methanomicrobiales". Syst. Appl. Microbiol. 15 (3): 363–371. doi:10.1016/S0723-2020(11)80209-2. PMID 11540078. 
  • Zellner G; Stackebrandt E; Messner P; Tindall BJ et al. (1989). "Methanocorpusculaceae fam. nov., represented by Methanocorpusculum parvum, Methanocorpusculum sinense spec. nov. and Methanocorpusculum bavaricum spec. nov". Arch. Microbiol. 151 (5): 381–390. doi:10.1007/BF00416595. PMID 2742452. 
  • Balch WE; Fox GE; Magrum LJ; Woses CR et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMID 390357. 

Scientific books

Scientific databases

External links

Wikidata ☰ Q4044110 entry




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