Biology:Methanomicrobiales

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Short description: Order of archaea

Methanomicrobiales
Scientific classification e
Domain: Archaea
Kingdom: Euryarchaeota
Class: Methanomicrobia
Order: Methanomicrobiales
Balch and Wolfe 1981
Families

In the taxonomy of microorganisms, the Methanomicrobiales are an order of the Methanomicrobia.[1] Methanomicrobiales are strictly carbon dioxide reducing methanogens, using hydrogen or formate as the reducing agent.[2] As seen from the phylogenetic tree based on 'The All-Species Living Tree' Project the family Methanomicrobiaceae is highly polyphyletic within the Methanomicrobiales.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_06_2022[4][5][6] 53 marker proteins based GTDB 08-RS214[7][8][9]
 
 

Methanomicrobiaceae (incl. "Methanoculleaceae")

 
 
 
 

"Methanosphaerulaceae"

 
 
 

Methanolinea tarda

 
 
 

Methanospirillaceae

 
 
 

Methanolinea mesophila

 
 

Methanoregulaceae

 
 
 
 
 
 
 

"Methanofollaceae"

 
 
 

Methanocalculaceae Zhilina et al. 2014

 
 

Methanocorpusculaceae

 
 
 
 
 
 
 

Methanocorpusculaceae Zellner et al. 1989 (incl. Methanocalculaceae)

 
 
 

"Methanofollaceae"

 
 
 
 

"Methanosphaerulaceae" Rinke et al. 2020

 
 
 

Methanospirillaceae Boone et al. 2002

 
 

Methanoregulaceae Sakai et al. 2012

 
 
 
 
 

"Methanoculleaceae" Rinke et al. 2020

 
 

Methanomicrobiaceae Balch & Wolfe 1981

 
 
 
 
 

See also

References

  1. ↑ 1.0 1.1 Sayers. "Methanomicrobiales". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2191&lvl=3&lin=f&keep=1&srchmode=1&unlock. Retrieved 2022-06-05. 
  2. ↑ D.R. Boone (2001). Bergey's Manual of Systematic Bacteriology (2nd ed.). New York: Springer. https://archive.org/details/bergeysmanualofs00boon. 
  3. ↑ J.P. Euzéby. "Methanomicrobiales". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/order/methanomicrobiales. Retrieved 2021-11-17. 
  4. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  5. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree. 
  6. ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf. 
  7. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  8. ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree. 
  9. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Scientific journals

  • Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928. 
  • Euzeby JP; Tindall BJ (2001). "Nomenclatural type of orders: corrections necessary according to Rules 15 and 21a of the Bacteriological Code (1990 Revision), and designation of appropriate nomenclatural types of classes and subclasses. Request for an Opinion". Int. J. Syst. Evol. Microbiol. 51 (Pt 2): 725–727. doi:10.1099/00207713-51-2-725. PMID 11321122. 
  • Rouviere P; Mandelco L; Winker S; Woese CR (1992). "A detailed phylogeny for the Methanomicrobiales". Syst. Appl. Microbiol. 15 (3): 363–371. doi:10.1016/S0723-2020(11)80209-2. PMID 11540078. 
  • Balch WE; Fox GE; Magrum LJ; Woses CR et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMID 390357. 

Scientific books

  • Garrity GM; Bell JA; Lilburn TG (2004). "Taxonomic Outline of the Prokaryotes". Bergey's Manual of Systematic Bacteriology, release 4.0 (2nd ed.). New York: Springer Verlag. doi:10.1007/bergeysoutline200310. 

Scientific databases

External links

Wikidata ☰ Q4044130 entry



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