Biology:Thermoplasmata
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Short description: Class of archaea
| Thermoplasmata | |
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| Cuniculiplasma divulgatum | |
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| Class: | Thermoplasmata Reysenbach 2002
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In taxonomy, the Thermoplasmata are a class of the Euryarchaeota.[1]
All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms growing at a minimum pH of 0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most members of Thermoplasmata are thermophilic.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[1]
| 16S rRNA based LTP_06_2022[3][4][5] | 53 marker proteins based GTDB 08-RS214[6][7][8] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ↑ 1.0 1.1 Sayers. "Thermoplasmata". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=183967&lvl=4&lin=f&keep=1&srchmode=1&unlock.
- ↑ J.P. Euzéby. "Thermoplasmata". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/class/thermoplasmata.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree.
- ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf.
- ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
Scientific journals
- Li, Chao Lun; Jiang, Yun Tao; Liu, Da Li; Qian, JieLei; Liang, Jing Ping; Shu, Rong (August 2014). "Prevalence and quantification of the uncommon Archaea phylotype Thermoplasmata in chronic periodontitis". Archives of Oral Biology 59 (8): 822–828. doi:10.1016/j.archoralbio.2014.05.011. PMID 24859768.
- Poulsen, Morten; Schwab, Clarissa; Jensen, Bent Borg; Engberg, Ricarda M.; Spang, Anja; Canibe, Nuria; Hojberg, Ole (June 2013). "Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen". Nature Communications 4 (1428): 1947. doi:10.1038/ncomms2847. Bibcode: 2013NatCo...4.1947P.
- Cavalier-Smith, T (2002). "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification". Int. J. Syst. Evol. Microbiol. 52 (Pt 1): 7–76. doi:10.1099/00207713-52-1-7. PMID 11837318.
- Woese, CR; Kandler O; Wheelis ML (1990). "Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya". Proc. Natl. Acad. Sci. USA 87 (12): 4576–4579. doi:10.1073/pnas.87.12.4576. PMID 2112744. Bibcode: 1990PNAS...87.4576W.
Scientific books
- Reysenbach, AL (2001). "Class IV. Thermoplasmata class. nov.". in DR Boone. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2. https://archive.org/details/bergeysmanualofs00boon/page/169.
- Garrity GM; Holt JG (2001). "Phylum AII. Euryarchaeota phy. nov.". in DR Boone. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2. https://archive.org/details/bergeysmanualofs00boon/page/169.
Scientific databases
- PubMed references for Thermoplasmata
- PubMed Central references for Thermoplasmata
- Google Scholar references for Thermoplasmata
External links
- NCBI taxonomy page for Thermoplasmata
- Search Tree of Life taxonomy pages for Thermoplasmata
- Search Species2000 page for Thermoplasmata
- MicrobeWiki page for Thermoplasmata
- LPSN page for Thermoplasmata
Wikidata ☰ Q1135456 entry
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