Biology:Halalkalicoccus

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Short description: Genus of archaea

Halalkalicoccus
Scientific classification
Domain:
Archaea
Kingdom:
Euryarchaeota
Phylum:
Euryarchaeota
Class:
Halobacteria
Order:
Halobacteriales
Family:
Halobacteriaceae
Genus:
Halalkalicoccus

Xue et al. 2005
Type species
Halalkalicoccus tibetensis
Xue et al. 2005
Species
  • H. jeotgali
  • H. paucihalophilus
  • H. subterraneus
  • H. tibetensis

Halalkalicoccus (common abbreviation Hac.[1]) is a genus of the Halobacteriaceae.[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[2]

16S rRNA based LTP_06_2022[4][5][6] 53 marker proteins based GTDB 08-RS214[7][8][9]
Halalkalicoccus
 

H. tibetensis Xue et al. 2005

 
 
 

H. paucihalophilus Liu et al. 2013

 
 
 

H. jeotgali Roh et al. 2007

 
 

H. subterraneus Chen et al. 2020

 
 
 
 
Halalkalicoccus
 

H. subterraneus

 
 
 

H. jeotgali

 
 

H. paucihalophilus

 
 
 

See also

References

  1. ↑ "Halalkalicoccus tibetensis gen. nov., sp. nov., representing a novel genus of haloalkaliphilic archaea". Int. J. Syst. Evol. Microbiol. 55 (Pt 6): 2501–2505. Published online 29 July 2005. doi. 2005. doi:10.1099/ijs.0.63916-0. PMID 16280517. 
  2. ↑ 2.0 2.1 Sayers. "Halalkalicoccus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=332246&lvl=3&lin=f&keep=1&srchmode=1&unlock. Retrieved 2023-08-15. 
  3. ↑ J.P. Euzéby. "Halalkalicoccus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halalkalicoccus. Retrieved 2023-08-15. 
  4. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  5. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree. 
  6. ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf. 
  7. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  8. ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree. 
  9. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Scientific journals

  • "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. 2000. doi:10.1099/00207713-50-3-1405. PMID 10843089. 

Scientific books

  • Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". in RE Buchanan. Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.. 

Scientific databases

External links

Wikidata ☰ Q5641068 entry



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