Biology:Halorhabdus

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Short description: Genus of archaea

Halorhabdus
Scientific classification
Domain:
Archaea
Kingdom:
Euryarchaeota
Phylum:
Euryarchaeota
Class:
Halobacteria
Order:
Halobacteriales
Family:
Haloarculaceae
Genus:
Halorhabdus

Wainø et al. 2000 emend. Antunes et al. 2008[1]
Type species
Halorhabdus utahensis
Wainø et al. 2000
Species

Halorhabdus is a genus of halophilic archaea in the Haloarculaceae. With an extremely high salinity optimum of 27% NaCl, Halorhabdus has one of the highest reported salinity optima of any living organism.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2]

16S rRNA based LTP_06_2022[3][4][5] 53 marker proteins based GTDB 08-RS214[6][7][8]
Halorhabdus
 

H. rudnickae

 
 
 

H. tiamatea

 
 

H. utahensis

 
 
 
Halorhabdus
 
 

H. tiamatea Antunes et al. 2008

 
 

H. utahensis Waino et al. 2000

 
 
 
 

H. salina Wang et al. 2022

 
 
 

H. amylolytica Wang et al. 2022

 
 

H. rudnickae Albuquerque et al. 2016

 
 
 
 

See also

References

  1. ↑ 1.0 1.1 J.P. Euzéby. "Halorhabdus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halorhabdus. 
  2. ↑ Sayers. "Halorhabdus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=146825&lvl=3&keep=1&srchmode=1&unlock. 
  3. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  4. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree. 
  5. ↑ "LTP_06_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf. 
  6. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  7. ↑ "ar53_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree. 
  8. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Scientific journals

  • "Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah". Int. J. Syst. Evol. Microbiol. 50: 183–190. 2000. doi:10.1099/00207713-50-1-183. PMID 10826803. 
  • "The modern Latin word rhabdus belongs to the feminine gender, inducing necessary corrections according to Rules 65(2),12c(1) and 13b of the Bacteriological Code (1990 Revision)". Int. J. Syst. Evol. Microbiol. 50 (4): 1691–1692. 2000. doi:10.1099/00207713-50-4-1691. PMID 10939678. 
  • "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. 2000. doi:10.1099/00207713-50-3-1405. PMID 10843089. 

Scientific books

  • Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". in RE Buchanan. Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.. 

Scientific databases

External links

Wikidata ☰ Q5643442 entry




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