Biology:List of sequenced fungi genomes

From HandWiki
Short description: none

This list of sequenced fungi genomes contains all the fungal species known to have publicly available complete genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organelle only sequences.

This list is incomplete; you can help by expanding it.

Ascomycota

Dothideomycetes

Eurotiomycetes

Leotiomycetes

Pezizomycetes

  • Cladobotryum protrusum (2019[31])
  • Tuber melanosporum Mel28, Périgord black truffle (2010[32])

Saccharomycetes

Schizosaccharomycetes

Sordariomycetes

Basidiomycota

Agaricomycetes

Pucciniomycetes (formerly Urediniomycetes)

Tremellomycetes

Ustilaginomycetes

Wallemiomycetes

Chytridiomycota

Chytridiomycota includes fungi with spores that have flagella (zoospores) and are a sister group to more advanced land fungi that lack flagella. Several chytrid species are pathogens, but have not had their genomes sequenced yet.

Blastocladiomycota

Neocallimastigomycota

Microsporidia

Mucoromycota

Mucoromycotina

Glomeromycotina

Mortierellomycotina

  • Mortierella alpina Strain: ATCC 32222, commercial source of arachidonic acid (2011[123])
  • Lobosporangium transversale
  • Mortierella elongata
  • Mortierella humilis
  • Mortierella multidivaricata
  • Mortierella verticillata

Zoopagomycota

Kickxellomycotina

  • Coemansia reversa
  • Coemansia spiralis
  • Kickxella alabastrina
  • Linderina pennicpora
  • Martensiomyces pterosporus
  • Ramicandelaber brevisporus
  • Smittium culicis
  • Smittium mucronatum
  • Zancudomyces culisetae

Entomophthoromycotina

Zoopagomycotina

  • Syncephalis fuscata
  • Syncephalis plumigaleata
  • Syncephalis pseudoplumigaleata
  • Piptocephalis cylindrospora

See also

External links

References

  1. ↑ "Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species". BMC Genomics 15 (1): 549. July 2014. doi:10.1186/1471-2164-15-549. PMID 24984952. 
  2. ↑ "Whole genome duplication and enrichment of metal cation transporters revealed by de novo genome sequencing of extremely halotolerant black yeast Hortaea werneckii". PLOS ONE 8 (8): e71328. 2013. doi:10.1371/journal.pone.0071328. PMID 23977017. Bibcode: 2013PLoSO...871328L. 
  3. ↑ Nislow, Corey; Stajich, Jason E.; Gostinčar, Cene; Lenassi, Metka; Cimerman, Nina Gunde; Plemenitaš, Ana; Formby, Sean; Neira, Mauricio et al. (2017-07-01). "Insight into the Recent Genome Duplication of the Halophilic Yeast Hortaea werneckii: Combining an Improved Genome with Gene Expression and Chromatin Structure" (in en). G3: Genes, Genomes, Genetics 7 (7): 2015–2022. doi:10.1534/g3.117.040691. ISSN 2160-1836. PMID 28500048. 
  4. ↑ "Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations". Nature Communications 2 (2): 202. February 2011. doi:10.1038/ncomms1189. PMID 21326234. Bibcode: 2011NatCo...2..202R. 
  5. ↑ "Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina". BMC Genomics 13 (1): 493. September 2012. doi:10.1186/1471-2164-13-493. PMID 22992219. 
  6. ↑ "Home - Pseudocercospora (Mycosphaerella) fijiensis v2.0". http://genome.jgi-psf.org/Mycfi2/Mycfi2.home.html. 
  7. ↑ "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis". PLOS Genetics 7 (6): e1002070. June 2011. doi:10.1371/journal.pgen.1002070. PMID 21695235. 
  8. ↑ "Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum". The Plant Cell 19 (11): 3347–68. November 2007. doi:10.1105/tpc.107.052829. PMID 18024570. 
  9. ↑ Team, diArk. "diArk - species_list". http://www.diark.org/diark/species_list/Pyrenophora_tritici_repentis_Pt_1C_BFP. 
  10. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gi01094. 
  11. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gi01787. 
  12. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01529. 
  13. ↑ 13.0 13.1 "Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection". mBio 3 (5): e00259-12. 2012. doi:10.1128/mBio.00259-12. PMID 22951933. 
  14. ↑ "Home - Aspergillus aculeatus ATCC16872 v1.1". http://genome.jgi-psf.org/Aspac1/Aspac1.home.html. 
  15. ↑ "Home - Aspergillus carbonarius ITEM 5010 v3". http://genome.jgi-psf.org/Aspca3/Aspca3.home.html. 
  16. ↑ 16.0 16.1 16.2 "Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus". PLOS Genetics 4 (4): e1000046. April 2008. doi:10.1371/journal.pgen.1000046. PMID 18404212. 
  17. ↑ "Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus". Nature 438 (7071): 1151–6. December 2005. doi:10.1038/nature04332. PMID 16372009. Bibcode: 2005Natur.438.1151N. 
  18. ↑ "Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, used for brewing the Japanese distilled spirit shochu". Eukaryotic Cell 10 (11): 1586–7. November 2011. doi:10.1128/EC.05224-11. PMID 22045919. 
  19. ↑ "Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae". Nature 438 (7071): 1105–15. December 2005. doi:10.1038/nature04341. PMID 16372000. Bibcode: 2005Natur.438.1105G. 
  20. ↑ "Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88". Nature Biotechnology 25 (2): 221–31. February 2007. doi:10.1038/nbt1282. PMID 17259976. 
  21. ↑ "Genome sequencing and analysis of Aspergillus oryzae". Nature 438 (7071): 1157–61. December 2005. doi:10.1038/nature04300. PMID 16372010. Bibcode: 2005Natur.438.1157M. https://www.escholar.manchester.ac.uk/api/datastream?publicationPid=uk-ac-man-scw:1d14413&datastreamId=POST-PEER-REVIEW-PUBLISHERS-DOCUMENT.PDF. 
  22. ↑ "DiArk | species_list". http://www.diark.org/diark/species_list/Aspergillus_terreus_NIH2624. 
  23. ↑ 23.0 23.1 23.2 "Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives". Genome Research 19 (10): 1722–31. October 2009. doi:10.1101/gr.087551.108. PMID 19717792. 
  24. ↑ "Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis". PLOS Genetics 7 (10): e1002345. October 2011. doi:10.1371/journal.pgen.1002345. PMID 22046142. 
  25. ↑ "Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum". Nature Biotechnology 26 (10): 1161–8. October 2008. doi:10.1038/nbt.1498. PMID 18820685. https://www.rug.nl/research/portal/files/56956982/Genome_sequencing_and_analysis_of_the_filamentous_fungus_Penicillium_chrysogenum.pdf. 
  26. ↑ 26.0 26.1 "Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus". BMC Genomics 13: 646. November 2012. doi:10.1186/1471-2164-13-646. PMID 23171342. 
  27. ↑ "Draft genome sequence of Penicillium marneffei strain PM1". Eukaryotic Cell 10 (12): 1740–1. December 2011. doi:10.1128/EC.05255-11. PMID 22131218. 
  28. ↑ 28.0 28.1 "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea". PLOS Genetics 7 (8): e1002230. August 2011. doi:10.1371/journal.pgen.1002230. PMID 21876677. 
  29. ↑ "Genome sequence of the fungus Glarea lozoyensis: the first genome sequence of a species from the Helotiaceae family". Eukaryotic Cell 11 (2): 250. February 2012. doi:10.1128/EC.05302-11. PMID 22302591. 
  30. ↑ "Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides". PLOS Genetics 8 (3): e1002558. 2012. doi:10.1371/journal.pgen.1002558. PMID 22396667. 
  31. ↑ "Cladobotryum protrusum Provides Insights into the Evolution and Pathogenic Mechanisms of the Cobweb Disease Pathogen on Cultivated Mushroom". Genes 10 (2): 124. February 2019. doi:10.3390/genes10020124. PMID 30744046. 
  32. ↑ "Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis". Nature 464 (7291): 1033–8. April 2010. doi:10.1038/nature08867. PMID 20348908. Bibcode: 2010Natur.464.1033M. 
  33. ↑ "The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome". Science 304 (5668): 304–7. April 2004. doi:10.1126/science.1095781. PMID 15001715. Bibcode: 2004Sci...304..304D. 
  34. ↑ "The diploid genome sequence of Candida albicans". Proceedings of the National Academy of Sciences of the United States of America 101 (19): 7329–34. May 2004. doi:10.1073/pnas.0401648101. PMID 15123810. Bibcode: 2004PNAS..101.7329J. 
  35. ↑ 35.0 35.1 35.2 35.3 35.4 35.5 "Evolution of pathogenicity and sexual reproduction in eight Candida genomes". Nature 459 (7247): 657–62. June 2009. doi:10.1038/nature08064. PMID 19465905. Bibcode: 2009Natur.459..657B. 
  36. ↑ EBI project page
  37. ↑ 37.0 37.1 37.2 37.3 "Genome evolution in yeasts". Nature 430 (6995): 35–44. July 2004. doi:10.1038/nature02579. PMID 15229592. Bibcode: 2004Natur.430...35D. 
  38. ↑ "Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis". PLOS ONE 7 (4): e35750. 2012. doi:10.1371/journal.pone.0035750. PMID 22563396. Bibcode: 2012PLoSO...735750R. 
  39. ↑ "Draft genome sequence of salt-tolerant yeast Debaryomyces hansenii var. hansenii MTCC 234". Eukaryotic Cell 11 (7): 961–2. July 2012. doi:10.1128/EC.00137-12. PMID 22744717. 
  40. ↑ "The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties". International Journal of Food Microbiology 157 (2): 202–9. July 2012. doi:10.1016/j.ijfoodmicro.2012.05.008. PMID 22663979. https://escholarship.org/uc/item/0vt635rv. 
  41. ↑ "Home - Ogataea polymorpha NCYC 495 leu1.1 v2.0". http://genome.jgi-psf.org/Hanpo2/Hanpo2.home.html. 
  42. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01520. 
  43. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01521. 
  44. ↑ 44.0 44.1 "Comparative genomics of protoploid Saccharomycetaceae". Genome Research 19 (10): 1696–709. October 2009. doi:10.1101/gr.091546.109. PMID 19525356. 
  45. ↑ 45.0 45.1 45.2 45.3 "Finding functional features in Saccharomyces genomes by phylogenetic footprinting". Science 301 (5629): 71–6. July 2003. doi:10.1126/science.1084337. PMID 12775844. Bibcode: 2003Sci...301...71C. 
  46. ↑ 46.0 46.1 46.2 46.3 "Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents". Proceedings of the National Academy of Sciences of the United States of America 108 (50): 20024–9. December 2011. doi:10.1073/pnas.1112808108. PMID 22123960. Bibcode: 2011PNAS..10820024G. 
  47. ↑ 47.0 47.1 47.2 "Sequencing and comparison of yeast species to identify genes and regulatory elements". Nature 423 (6937): 241–54. May 2003. doi:10.1038/nature01644. PMID 12748633. Bibcode: 2003Natur.423..241K. 
  48. ↑ 48.0 48.1 48.2 "The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus". G3 1 (1): 11–25. June 2011. doi:10.1534/g3.111.000273. PMID 22384314. 
  49. ↑ "High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome". BMC Genomics 14 (1): 69. January 2013. doi:10.1186/1471-2164-14-69. PMID 23368932. 
  50. ↑ "Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production". Genome Research 19 (12): 2258–70. December 2009. doi:10.1101/gr.091777.109. PMID 19812109. 
  51. ↑ "Life with 6000 genes". Science 274 (5287): 546, 563–7. October 1996. doi:10.1126/science.274.5287.546. PMID 8849441. Bibcode: 1996Sci...274..546G. 
  52. ↑ "Genotype to phenotype: a complex problem". Science 328 (5977): 469. April 2010. doi:10.1126/science.1189015. PMID 20413493. Bibcode: 2010Sci...328..469D. 
  53. ↑ "Population genomics of domestic and wild yeasts". Nature 458 (7236): 337–41. March 2009. doi:10.1038/nature07743. PMID 19212322. Bibcode: 2009Natur.458..337L. 
  54. ↑ "Genome sequence of the lager brewing yeast, an interspecies hybrid". DNA Research 16 (2): 115–29. April 2009. doi:10.1093/dnares/dsp003. PMID 19261625. 
  55. ↑ "Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis". Nature Biotechnology 25 (3): 319–26. March 2007. doi:10.1038/nbt1290. PMID 17334359. 
  56. ↑ "Home - Spathaspora passalidarum NRRL Y-27907 v2.0". http://genome.jgi-psf.org/Spapa3/Spapa3.home.html. 
  57. ↑ "Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication". Proceedings of the National Academy of Sciences of the United States of America 104 (20): 8397–402. May 2007. doi:10.1073/pnas.0608218104. PMID 17494770. Bibcode: 2007PNAS..104.8397S. 
  58. ↑ "Comparative functional genomics of the fission yeasts". Science 332 (6032): 930–6. May 2011. doi:10.1126/science.1203357. PMID 21511999. Bibcode: 2011Sci...332..930R. 
  59. ↑ "The genome sequence of Schizosaccharomyces pombe". Nature 415 (6874): 871–80. February 2002. doi:10.1038/nature724. PMID 11859360. Bibcode: 2002Natur.415..871W. https://lirias.kuleuven.be/handle/123456789/36008. 
  60. ↑ 60.0 60.1 "Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses". Nature Genetics 44 (9): 1060–5. September 2012. doi:10.1038/ng.2372. PMID 22885923. 
  61. ↑ "Genome sequence of the filamentous soil fungus Chaetomium cochliodes reveals abundance of genes for heme enzymes from all peroxidase and catalase superfamilies". BMC Genomics 17 (1): 763. September 2016. doi:10.1186/s12864-016-3111-6. PMID 27681232. 
  62. ↑ "Chaetomium globosum Genome Project". 15 May 2015. http://www.broadinstitute.org/annotation/genome/chaetomium_globosum.2/GenomeStats.html. 
  63. ↑ "Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile". Cell 146 (2): 277–89. July 2011. doi:10.1016/j.cell.2011.06.039. PMID 21784248. 
  64. ↑ 64.0 64.1 "Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium". Nature 464 (7287): 367–73. March 2010. doi:10.1038/nature08850. PMID 20237561. Bibcode: 2010Natur.464..367M. 
  65. ↑ EBI project page
  66. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01519. 
  67. ↑ "Genome of blue stain fungus evolved to bypass tree defense in mountain pine beetle epidemic: UBC research". 24 January 2011. http://www.publicaffairs.ubc.ca/2011/01/24/genome-of-blue-stain-fungus-evolved-to-bypass-tree-defense-in-mountain-pine-beetle-epidemic-ubc-research/. 
  68. ↑ "The genome sequence of the rice blast fungus Magnaporthe grisea". Nature 434 (7036): 980–6. April 2005. doi:10.1038/nature03449. PMID 15846337. Bibcode: 2005Natur.434..980D. 
  69. ↑ "Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum". PLOS Genetics 7 (1): e1001264. January 2011. doi:10.1371/journal.pgen.1001264. PMID 21253567. 
  70. ↑ "The genome sequence of the filamentous fungus Neurospora crassa". Nature 422 (6934): 859–68. April 2003. doi:10.1038/nature01554. PMID 12712197. Bibcode: 2003Natur.422..859G. 
  71. ↑ "Home - Neurospora tetrasperma FGSC 2508 mat A v2.0". http://genome.jgi-psf.org/Neute_matA2/Neute_matA2.home.html. 
  72. ↑ "The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion". PLOS Genetics 5 (8): e1000618. August 2009. doi:10.1371/journal.pgen.1000618. PMID 19714214. 
  73. ↑ "The genome sequence of the model ascomycete fungus Podospora anserina". Genome Biology 9 (5): R77. 2008. doi:10.1186/gb-2008-9-5-r77. PMID 18460219. 
  74. ↑ "Home - Myceliophthora thermophila (Sporotrichum thermophile) v2.0". http://genome.jgi-psf.org/Spoth2/Spoth2.home.html. 
  75. ↑ "Home - Thielavia terrestris v2.0". http://genome.jgi-psf.org/Thite2/Thite2.home.html. 
  76. ↑ "Home - Trichoderma atroviride v2.0". http://genome.jgi-psf.org/Triat2/Triat2.home.html. 
  77. ↑ 77.0 77.1 "Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)". Nature Biotechnology 26 (5): 553–60. May 2008. doi:10.1038/nbt1403. PMID 18454138. 
  78. ↑ "Home - Trichoderma virens Gv29-8 v2.0". http://genome.jgi-psf.org/TriviGv29_8_2/TriviGv29_8_2.home.html. 
  79. ↑ Team, diArk. "diArk - species_list". http://www.diark.org/diark/species_list/Verticillium_albo_atrum_VaMs_102. 
  80. ↑ "Home - Agaricus bisporus var bisporus (H97) v2.0". http://genome.jgi-psf.org/Agabi_varbisH97_2/Agabi_varbisH97_2.home.html. 
  81. ↑ "The genome sequence of the commercially cultivated mushroom Agrocybe aegerita reveals a conserved repertoire of fruiting-related genes and a versatile suite of biopolymer-degrading enzymes". BMC Genomics 19 (1): 48. January 2018. doi:10.1186/s12864-017-4430-y. PMID 29334897. 
  82. ↑ 82.00 82.01 82.02 82.03 82.04 82.05 82.06 82.07 82.08 82.09 82.10 82.11 "The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes". Science 336 (6089): 1715–9. June 2012. doi:10.1126/science.1221748. PMID 22745431. Bibcode: 2012Sci...336.1715F. 
  83. ↑ "Whole genome sequence of Auricularia heimuer (Basidiomycota, Fungi), the third most important cultivated mushroom worldwide". Genomics 111 (1): 50–58. January 2019. doi:10.1016/j.ygeno.2017.12.013. PMID 29288711. 
  84. ↑ "Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)". Proceedings of the National Academy of Sciences of the United States of America 107 (26): 11889–94. June 2010. doi:10.1073/pnas.1003391107. PMID 20547848. Bibcode: 2010PNAS..10711889S. 
  85. ↑ "Short-read sequencing for genomic analysis of the brown rot fungus Fibroporia radiculosa". Applied and Environmental Microbiology 78 (7): 2272–81. April 2012. doi:10.1128/AEM.06745-11. PMID 22247176. Bibcode: 2012ApEnM..78.2272T. 
  86. ↑ "Home - Heterobasidion annosum v2.0". http://genome.jgi-psf.org/Hetan2/Hetan2.home.html. 
  87. ↑ "The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis". Nature 452 (7183): 88–92. March 2008. doi:10.1038/nature06556. PMID 18322534. Bibcode: 2008Natur.452...88M. 
  88. ↑ "Whole genome de novo sequencing and genome annotation of the world popular cultivated edible mushroom, Lentinula edodes". Journal of Biotechnology 223: 24–5. April 2016. doi:10.1016/j.jbiotec.2016.02.032. PMID 26924240. 
  89. ↑ "A genome survey of Moniliophthora perniciosa gives new insights into Witches' Broom Disease of cacao". BMC Genomics 9: 548. November 2008. doi:10.1186/1471-2164-9-548. PMID 19019209. 
  90. ↑ "Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78". Nature Biotechnology 22 (6): 695–700. June 2004. doi:10.1038/nbt967. PMID 15122302. 
  91. ↑ "Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica". PLOS Pathogens 7 (10): e1002290. October 2011. doi:10.1371/journal.ppat.1002290. PMID 22022265. 
  92. ↑ "Home - Pleurotus ostreatus PC15 v2.0". http://genome.jgi-psf.org/PleosPC15_2/PleosPC15_2.home.html. 
  93. ↑ "The diploid genome of the only sclerotia-forming wild-type species in the genus Pleurotus -Pleurotus tuber-regium - provides insights into the mechanism of its biomass conversion from lignocellulose substrates". Journal of Biotechnology 283: 22–27. October 2018. doi:10.1016/j.jbiotec.2018.07.009. PMID 30003974. 
  94. ↑ "Home - Postia placenta MAD 698-R v1.0". http://genome.jgi-psf.org/Pospl1/Pospl1.home.html. 
  95. ↑ "Genome sequence of the model mushroom Schizophyllum commune". Nature Biotechnology 28 (9): 957–63. September 2010. doi:10.1038/nbt.1643. PMID 20622885. 
  96. ↑ "The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi". Science 333 (6043): 762–5. August 2011. doi:10.1126/science.1205411. PMID 21764756. Bibcode: 2011Sci...333..762E. http://www.escholarship.org/uc/item/7dq3n3h2. 
  97. ↑ "Home - Melampsora larici-populina v1.0". http://genome.jgi.doe.gov/Mellp1/Mellp1.home.html. 
  98. ↑ "Obligate biotrophy features unraveled by the genomic analysis of rust fungi". Proceedings of the National Academy of Sciences of the United States of America 108 (22): 9166–71. May 2011. doi:10.1073/pnas.1019315108. PMID 21536894. Bibcode: 2011PNAS..108.9166D. 
  99. ↑ "Potential for re-emergence of wheat stem rust in the United Kingdom". Communications Biology 1 (1): 13. 2018-02-08. doi:10.1038/s42003-018-0013-y. PMID 30271900. 
  100. ↑ 100.0 100.1 http://www.broadinstitute.org/annotation/genome/puccinia_group/MultiHome.html Broad Institute
  101. ↑ "Home - Rhodotorula graminis strain WP1 v1.1". http://genome.jgi-psf.org/Rhoba1_1/Rhoba1_1.home.html. 
  102. ↑ "JGI entry". http://genome.jgi-psf.gov/Sporo1/Sporo1.home.html. 
  103. ↑ "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans". Science 307 (5713): 1321–4. February 2005. doi:10.1126/science.1103773. PMID 15653466. Bibcode: 2005Sci...307.1321L. 
  104. ↑ "JGI GOLD | Project". http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gi01114. 
  105. ↑ 105.0 105.1 "Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens". Proceedings of the National Academy of Sciences of the United States of America 104 (47): 18730–5. November 2007. doi:10.1073/pnas.0706756104. PMID 18000048. Bibcode: 2007PNAS..10418730X. 
  106. ↑ "Pathogenicity determinants in smut fungi revealed by genome comparison". Science 330 (6010): 1546–8. December 2010. doi:10.1126/science.1195330. PMID 21148393. Bibcode: 2010Sci...330.1546S. 
  107. ↑ "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis". Nature 444 (7115): 97–101. November 2006. doi:10.1038/nature05248. PMID 17080091. Bibcode: 2006Natur.444...97K. 
  108. ↑ "Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent". BMC Genomics 14: 617. September 2013. doi:10.1186/1471-2164-14-617. PMID 24034603. 
  109. ↑ "The genome of the xerotolerant mold Wallemia sebi reveals adaptations to osmotic stress and suggests cryptic sexual reproduction". Fungal Genetics and Biology 49 (3): 217–26. March 2012. doi:10.1016/j.fgb.2012.01.007. PMID 22326418. http://www.escholarship.org/uc/item/7d6261dx. 
  110. ↑ "Batrachochytrium Genome Project". 25 August 2016. http://www.broadinstitute.org/annotation/genome/batrachochytrium_dendrobatidis/MultiHome.html. 
  111. ↑ "Home - Batrachochytrium dendrobatidis JAM81 v1.0". http://genome.jgi.doe.gov/Batde5/Batde5.home.html. 
  112. ↑ 112.0 112.1 "Update for our Microbial Eukaryotes website users". 29 February 2016. http://www.broadinstitute.org/annotation/genome/multicellularity_project/MultiHome.html. 
  113. ↑ "Home - Gonapodya prolifera v1.0". http://genome.jgi.doe.gov/Ganpr1/Ganpr1.home.html. 
  114. ↑ "Home - Catenaria anguillulae PL171 v1.0". http://genome.jgi.doe.gov/Catan1/Catan1.home.html. 
  115. ↑ "Home - Piromyces sp. E2 v1.0". http://genome.jgi-psf.org/PirE2_1/PirE2_1.home.html. 
  116. ↑ "Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi". Nature 414 (6862): 450–3. November 2001. doi:10.1038/35106579. PMID 11719806. Bibcode: 2001Natur.414..450K. 
  117. ↑ "The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis". Nature Communications 1 (6): 77. September 2010. doi:10.1038/ncomms1082. PMID 20865802. Bibcode: 2010NatCo...1...77C. 
  118. ↑ "Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi". PLOS Pathogens 5 (1): e1000261. January 2009. doi:10.1371/journal.ppat.1000261. PMID 19132089. 
  119. ↑ "The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism". Genome Biology and Evolution 2: 304–9. July 2010. doi:10.1093/gbe/evq022. PMID 20624735. 
  120. ↑ "Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees". PLOS Pathogens 5 (6): e1000466. June 2009. doi:10.1371/journal.ppat.1000466. PMID 19503607. 
  121. ↑ "Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions". Genome Biology 10 (10): R106. 2009. doi:10.1186/gb-2009-10-10-r106. PMID 19807911. 
  122. ↑ "Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication". PLOS Genetics 5 (7): e1000549. July 2009. doi:10.1371/journal.pgen.1000549. PMID 19578406. 
  123. ↑ "Genome characterization of the oleaginous fungus Mortierella alpina". PLOS ONE 6 (12): e28319. 2011. doi:10.1371/journal.pone.0028319. PMID 22174787. Bibcode: 2011PLoSO...628319W. 
  124. ↑ Stajich, Jason E.; Lovett, Brian; Ettinger, Cassandra L.; Carter-House, Derreck A.; Kurbessoian, Tania; Kasson, Matt T. (2022-08-29). Rokas, Antonis. ed. "An Improved 1.5-Gigabase Draft Assembly of Massospora cicadina (Zoopagomycota), an Obligate Fungal Parasite of 13- and 17-Year Cicadas" (in en). Microbiology Resource Announcements 11 (10): e00367–22. doi:10.1128/mra.00367-22. ISSN 2576-098X. PMID 36036589. 



Retrieved from "https://handwiki.org/wiki/index.php?title=Biology:List_of_sequenced_fungi_genomes&oldid=3572017"