Biology:Desmospora: Difference between revisions

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{{Short description|Genus of bacteria}}
'''''Desmospora''''' is a bacterial genus from the family of [[Biology:Thermoactinomycetaceae|Thermoactinomycetaceae]].<ref name=LPSN/><ref name=UniProt/>
{{Taxobox
 
| color = lightgrey
==Phylogeny==
| name = Desmospora
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)<ref name=LPSN>{{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/genus/desmospora |title=Desmospora |access-date=2025-02-28 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN) |display-authors=et al.}}</ref> and [[Organization:National Center for Biotechnology Information|National Center for Biotechnology Information]] (NCBI).<ref name=NCBI>{{cite web |author=C.L. Schoch |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=500614&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock |title=Desmospora |access-date=2025-02-28 |publisher=[[Organization:National Center for Biotechnology Information|National Center for Biotechnology Information]] (NCBI) taxonomy database |display-authors=et al.}}</ref>
| domain = [[Biology:Bacteria|Bacteria]]
 
| phylum = [[Biology:Bacillota|Bacillota]]
{| class="wikitable"
| classis = [[Biology:Bacilli|Bacilli]]
|-
| ordo = [[Biology:Bacillales|Bacillales]]
! colspan=1 | 16S rRNA based LTP_10_2024<ref>{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}</ref><ref>{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}</ref><ref>{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}</ref>
| familia = [[Biology:Thermoactinomycetaceae|Thermoactinomycetaceae]]
! colspan=1 | 120 marker proteins based GTDB 09-RS220<ref name="about">{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database |access-date=10 May 2024}}</ref><ref name="tree">{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database |access-date=10 May 2024}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database |access-date=10 May 2024}}</ref>
| familia_authority =  
|-
| genus = '''''Desmospora'''''
| style="vertical-align:top|
| genus_authority = Yassin et al. 2009<ref name=Desmospora>{{cite journal|last1=Parte|first1=A.C.|title=Desmospora|journal=LPSN|url=https://lpsn.dsmz.de/genus/desmospora}}</ref>
{{Clade | style=font-size:90%;line-height:80%
| type_species = ''[[Biology:Desmospora activa|Desmospora activa]]''
|label1=''Desmospora''
| type_species_authority =Yassin et al. 2009
|1={{clade
| subdivision_ranks = [[Biology:Species|Species]]
  |1=''[[Biology:Desmospora activa|D. activa]]'' <small>Yassin et al. 2009</small>
| subdivision =  
  |2=''[[Biology:Desmospora profundinema|D. profundinema]]'' <small>Zhang et al. 2015</small>
* ''[[Biology:Desmospora activa|D. activa]]''
  }}
* ''[[Biology:Desmospora profundinema|D. profundinema]]''
}}
| synonyms =  
|
* ''Catenispora''<ref name=UniProt>{{cite journal|title=Desmospora|journal=www.uniprot.org|url=https://www.uniprot.org/taxonomy/500614}}</ref>
{{Clade | style=font-size:90%;line-height:80%
|label1=''Desmospora''
|1=''[[Biology:Desmospora activa|D. activa]]''
}}
}}
 
|}
'''''Desmospora''''' is a bacterial genus from the family of [[Biology:Thermoactinomycetaceae|Thermoactinomycetaceae]].<ref name=Desmospora/><ref name=UniProt/>


==See also==
==See also==

Latest revision as of 01:30, 23 April 2025

Desmospora is a bacterial genus from the family of Thermoactinomycetaceae.[1][2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[3]

16S rRNA based LTP_10_2024[4][5][6] 120 marker proteins based GTDB 09-RS220[7][8][9]
Desmospora
 

D. activa Yassin et al. 2009

 
 

D. profundinema Zhang et al. 2015

 
 
Desmospora

D. activa

 

See also

References

  1. ↑ 1.0 1.1 A.C. Parte. "Desmospora". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/desmospora. 
  2. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named UniProt
  3. ↑ C.L. Schoch. "Desmospora". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=500614&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock. 
  4. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  5. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  6. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  7. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  8. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  9. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Yassin, A. F.; Hupfer, H.; Klenk, H.-P.; Siering, C. (1 March 2009). "Desmospora activa gen. nov., sp. nov., a thermoactinomycete isolated from sputum of a patient with suspected pulmonary tuberculosis, and emended description of the family Thermoactinomycetaceae Matsuo et al. 2006". International Journal of Systematic and Evolutionary Microbiology 59 (3): 454–459. doi:10.1099/ijs.0.001362-0. PMID 19244421. 
  • Tian, Xinpeng; Zhang, Si; Zhang, Yi; Li, Jie (1 August 2015). "Marinithermofilum abyssi gen. nov., sp. nov. and Desmospora profundinema sp. nov., isolated from a deep-sea sediment, and emended description of the genus Desmospora Yassin et al. 2009". International Journal of Systematic and Evolutionary Microbiology 65 (8): 2622–2629. doi:10.1099/ijs.0.000314. PMID 25957053. 

Wikidata ☰ Q26210554 entry



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