Biology:Selenomonadales
| Selenomonadales | |
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Scientific classification 
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| Domain: | Bacteria |
| Phylum: | Bacillota |
| Class: | Negativicutes |
| Order: | Selenomonadales Marchandin et al. 2010 |
| Families and genera | |
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| Synonyms | |
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The Selenomonadales are an order of bacteria within the class Negativicutes; unlike most other members of Bacillota, they are Gram-negative. The phylogeny of this order was initially determined by 16S rRNA comparisons.[1] More recently, molecular markers in the form of conserved signature indels (CSIs) have been found specific for all Selenomonadales species.[2] On the basis of these markers, the Selenomonadales are inclusive of two distinct families, and are no longer the sole order within the Negativicutes. Several CSIs have also been found specific for both families, Sporomusaceae and Selenomonadceae.[2] Samples of bacterial strains within this order have been isolated from the root canals of healthy human teeth.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI)[5]
| 16S rRNA based LTP_08_2023[6][7][8] | 120 single copy marker proteins based GTDB 08-RS214[9][10][11] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ↑ Marchandin, H.; Teyssier, C.; Campos, J.; Jean-Pierre, H.; Roger, F.; Gay, B.; Carlier, J.-P.; Jumas-Bilak, E. (10 August 2009). "Negativicoccus succinicivorans gen. nov., sp. nov., isolated from human clinical samples, emended description of the family Veillonellaceae and description of Negativicutes classis nov., Selenomonadales ord. nov. and Acidaminococcaceae fam. nov. in the bacterial phylum Firmicutes". International Journal of Systematic and Evolutionary Microbiology 60 (6): 1271–1279. doi:10.1099/ijs.0.013102-0. PMID 19667386.
- ↑ 2.0 2.1 "Genome-based taxonomic framework for the class Negativicutes: division of the class Negativicutes into the orders Selenomonadales emend., Acidaminococcales ord. nov. and Veillonellales ord. nov.". Int J Syst Evol Microbiol 65 (9): 3203–3215. 2015. doi:10.1099/ijs.0.000347. PMID 25999592.
- ↑ Ribeiro, Adriana C.; Matarazzo, Flávia; Faveri, Marcelo; Zezell, Denise M.; Mayer, Marcia P.A. (21 June 2011). "Exploring Bacterial Diversity of Endodontic Microbiota by Cloning and Sequencing 16S rRNA". Journal of Endodontics 37 (7): 922–926. doi:10.1016/j.joen.2011.04.007. PMID 21689545.
- ↑ J.P. Euzéby. "Negativicutes". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/class/negativicutes.
- ↑ Sayers. "Negativicutes". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=909932&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree.
- ↑ "LTP_08_2023 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf.
- ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
External links
- PATRIC
- J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Order Selenomonadales
- NCBI
Wikidata ☰ Q7447901 entry
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