Biology:Thermaceae
| Thermaceae | |
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Scientific classification 
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| Domain: | Bacteria |
| Phylum: | Deinococcota |
| Class: | Deinococci |
| Order: | Thermales Rainey and da Costa 2002[1] |
| Family: | Thermaceae da Costa and Rainey 2002[1] |
| Genera | |
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Thermaceae is a family of bacteria belonging to the phylum Deinococcota. It is the only family in the order Thermales.[1] They are particularly resistant to heat, and live in the benthic zone of the Gulf of Mexico.[2]
Members of the order Thermales can be distinguished from all other bacteria through molecular signatures consisting of conserved signature indels (CSIs) and conserved signature proteins (CSPs) that are exclusively present in members of this order. Specifically, six CSIs were identified in the following proteins: DNA topoisomerase I, ABC transporter permease, citrate synthase, phosphoribosylformylglycinamidine synthase, pyruvate dehydrogenase and alpha-glucan phosphorylase.[3] 51 CSPs were also found to be exclusively shared by members of this order.[3]
In addition, a 76 aa CSI is present in the protein SecA preprotein translocase which is specific to all members of the order Thermales as well as Hydrogenibacillus schlegelii (also an thermophilic species).[4] Based on studies on other CSIs and CSPs, it is likely that some of these CSIs and CSPs could have implications in the thermophilic phenotype of Thermales species.[4]
Phylogeny
| 16S rRNA based LTP_01_2022[5][6][7] | 120 marker proteins based GTDB 07-RS207[8][9][10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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References
- ↑ 1.0 1.1 1.2 Fred A. Rainey; Milton S. da Costa (14 September 2015). Thermales ord. nov.. 1. doi:10.1002/9781118960608.obm00045. ISBN 9781118960608.
- ↑ Gulf of Mexico Origin, Waters, and Biota: Biodiversity. Texas A&M University Press. 2009. p. 38. ISBN 9781603442695. https://books.google.com/books?id=CphA8hiwaFIC&q=%22thermales%22+bacteria&pg=PA38. Retrieved 18 December 2016.
- ↑ 3.0 3.1 Ho, Jonathan; Adeolu, Mobolaji; Khadka, Bijendra; Gupta, Radhey S. (October 2016). "Identification of distinctive molecular traits that are characteristic of the phylum "Deinococcus-Thermus" and distinguish its main constituent groups". Systematic and Applied Microbiology 39 (7): 453–463. doi:10.1016/j.syapm.2016.07.003. ISSN 0723-2020. PMID 27506333. http://dx.doi.org/10.1016/j.syapm.2016.07.003.
- ↑ 4.0 4.1 Khadka, Bijendra; Persaud, Dhillon; Gupta, Radhey S. (2019-12-29). "Novel Sequence Feature of SecA Translocase Protein Unique to the Thermophilic Bacteria: Bioinformatics Analyses to Investigate Their Potential Roles". Microorganisms 8 (1): 59. doi:10.3390/microorganisms8010059. ISSN 2076-2607. PMID 31905784.
- ↑ "The LTP_01_2022". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/tree_LTP_all_01_2022.ntree.
- ↑ "LTP_01_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_01_2022_release_notes.pdf.
- ↑ "GTDB release 07-RS207". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r207.sp_labels". https://data.gtdb.ecogenomic.org/releases/release207/207.0/auxillary_files/bac120_r207.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
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