Short description
This article lists the orders of the Bacteria . The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[ 1] National Center for Biotechnology Information (NCBI)[ 2] [ 3]
Phylogeny
National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups.[ 4] [ 5] [ 6] [ 7] [ 8]
Cladogram was taken from GTDB release 09-RS220 (24 April 2024).[ 9] [ 10] [ 11]
Class "Bathosphaeria" Mehrshad et al. 2018
?"Bathosphaerales" Mehrshad et al. 2018 [JG30-KF-CM66]
Class "Martimicrobia" Williams et al. 2024
?"Martimicrobiales" Williams et al. 2024
Class ?"Poriflexia" Kogawa et al. 2022
Class "Spiritibacteria" Williams et al. 2024
?"Spiritibacterales" Williams et al. 2024
Class "Tarhunnaeia" Williams et al. 2024
?"Tarhunnaeales" Williams et al. 2024
Class "Uliximicrobia" Williams et al. 2024
?"Uliximicrobiales" Williams et al. 2024
Class "Umbricyclopia" Mehrshad et al. 2018
?"Umbricyclopales" Mehrshad et al. 2018 (TK10)
Class "Dormiibacteria" (sic) Montgomery et al. 2021 (AD3)
?"Aeolococcales" Montgomery et al. 2021
"Dormibacterales" (sic) Montgomery et al. 2021
Class "Limnocylindria" Mehrshad et al. 2018
"Limnocylindrales" Mehrshad et al. 2018 (SL56)
Class Ktedobacteria corrig. Cavaletti et al. 2007
Ktedobacterales corrig. Cavaletti et al. 2007 (Thermogemmatisporales)
Class Dehalococcoidia Löffler et al. 2013
"Australimonadales" Prabhu et al. 2024 [UBA2963]
Dehalococcoidales Löffler et al. 2013
"Lucifugimonadales" Lim et al. 2023 [UBA1151]
"Monstramariales" Landry et al. 2017 [UBA11650; UBA3495]
Tepidiformales Kochetkova et al. 2020
Class "Caldilineia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
Aggregatilineales Nakahara et al. 2019 ("Phototrophicales")
Anaerolineales Yamada et al. 2006
Ardenticatenales Kawaichi et al. 2013
Caldilineales Yamada et al. 2006
"Epilineales" Petriglieri et al. 2023
"Roseilineaceae" Ward et al. 2021 {J036}
"Promineifilales" corrig. Chuvochina et al. 2023
Thermoflexales Dodsworth et al. 2014
Class Chloroflexia Gupta et al. 2013
Class "Sysuimicrobiia" Liu et al. 2024 [CSP1-3]
"Sysuimicrobiales" Liu et al. 2024 Class "Heboniibacteriia" corrig. Carlton et al. 2023 (CAIYQO01)
"Heboniibacterales" corrig. Carlton et al. 2023
Class "Zipacnadia" Carlton et al. 2023 (UBA5377)
"Zipacnadales" Carlton et al. 2023
Class Abditibacteriia Tahon et al. 2018 (FBP)
Abditibacteriales Tahon et al. 2018
Class HRBIN17
"Candidatus Fervidibacter" Rinke et al. 2013 {HRBIN17: HRBIN17} (OctSpa1-106)
Class UBA5829
"Candidatus Hippobium" Gilroy et al. 2022 {UBA5829: UBA5829}
Class Fimbriimonadia Im et al. 2012
Fimbriimonadales Im et al. 2012
Class Chthonomonadia Oren, Parte & Garrity 2016
Chthonomonadales Lee et al. 2011
Class Armatimonadia Tamaki et al. 2011 (OP10)
Armatimonadales Tamaki et al. 2011 (Capsulimonadales) Class "Eudoremicrobiia" Paoli et al. 2022
?"Eudoremicrobiales" Paoli et al. 2022
Class "Xenobia" Ji et al. 2021 (UBP9)
"Xenobiales" Ji et al. 2021
Class "Eremiobacteriia" corrig. Ward, Cardona & Holland-Moritz 2019 (WPS2)
"Eremiobacterales" Ward, Cardona & Holland-Moritz 2019
"Vulcanimicrobiales Yabe et al. 2024 ("Baltobacterales"; "Palusbacterales"; "Rubrimentiphilales")
Firmicutes incertae sedis
Class Desulfitisporia Sorokin & Merkel 2023
Desulfitisporales Sorokin & Merkel 2023
Class Fermentithermobacillia Kadnikov et al. 2023
Fermentithermobacillales Kadnikov et al. 2023
Class Thermolithobacteria Sokolova et al. 2007
Thermolithobacterales Sokolova et al. 2007
Phylum Bacillota G
Class Limnochordia Watanabe, Kojima & Fukui 2015
Limnochordales Watanabe, Kojima & Fukui 2015
Class "Hydrogenisporia" Pallen, Rodriguez-R & Alikhan 2022
"Capillibacteriales" Pallen, Rodriguez-R & Alikhan 2022 [UBA10575]
"Hydrogenisporales" Pallen, Rodriguez-R & Alikhan 2022 [UBA8346]
Phylum Bacillota E
Class UBA3575
"Candidatus Acetocimmeria" Smith et al. 2021 {UBA3575: UBA3575}
Class Thermaerobacteria Chuvochina et al. 2024
Thermaerobacterales Chuvochina et al. 2024
Class Symbiobacteriia Chuvochina et al. 2024
Symbiobacteriales Chuvochina et al. 2024
Class Sulfobacillia Chuvochina et al. 2024
Sulfobacillales Chuvochina et al. 2024 Class Selenomonadia Oren, Parte & Garrity 2016
Acidaminococcales Campbell, Adeolu & Gupta 2015
Anaeromusales Chuvochina et al. 2024
"Dendrosporobacterales" Pallen, Rodriguez-R & Alikhan 2022
"Pelosinaceae" {DSM-13327}
Propionisporales Chuvochina et al. 2024
Selenomonadales Marchandin et al. 2010 "Acetonemaceae" {Sporomusales_A}
"Sporomusales"_C
"Sporomusales" Cavalier-Smith 2006
"Pelorhabdus " {UMGS1260: UMGS1260}
Lucifera Sanchez-Andrea et al. 2018 {UPPP01: UPPP01}Veillonellales Campbell, Adeolu & Gupta 2015
Class Peptococcia Chuvochina et al. 2024
Peptococcales Chuvochina et al. 2024
"Thermanaerosceptrales" Pallen, Rodriguez-R & Alikhan 2022 [DRI-13]
Class "Dehalobacteriia"
"Avidehalobacterales" Pallen, Rodriguez-R & Alikhan 2022 [UBA4068]
"Cryptoclostridiales" Pallen, Rodriguez-R & Alikhan 2022 [UBA7702]
"Dehalobacteriales"
Class Desulfitobacteriia Chuvochina et al. 2024
Desulfitobacteriales Chuvochina et al. 2024
"Heliobacteriales" Kinman 1994 ex Cavalier-Smith 2020
Class "Moorellia"
Calderihabitantales Chuvochina et al. 2024
Desulfitibacterales Chuvochina et al. 2024
Zhaonellaceae Lv et al. 2020 {DULZ01}
Moorellales Lv et al. 2020
Class DSM-12270
Thermacetogeniales Chuvochina et al. 2024
Class Syntrophomonadia Chuvochina et al. 2024
Syntrophomonadales Chuvochina et al. 2024
Class "Carboxydocellia" Pallen, Rodriguez-R & Alikhan 2022
"Carboxydocellales Chuvochina et al. 2024
Class Thermincolia Chuvochina et al. 2024
"Thermincolales Chuvochina et al. 2024
Class "Carboxydothermia" Pallen, Rodriguez-R & Alikhan 2022
Carboxydothermales Chuvochina et al. 2024
Class Desulfotomaculia Chuvochina et al. 2024
Ammonificales corrig. Chuvochina et al. 2024
Desulfotomaculales Chuvochina et al. 2024
Phylum Bacillota D
Class "Proteinivoracia"
Class "Dethiobacteria" Sorokin & Merkel 2022
"Candidatus Contubernalis" corrig. Zhilina et al. 2005 {SKNC01: SKNC01}
"Dethiobacterales" Sorokin & Merkel 2022
Class Natranaerobiia Chuvochina et al. 2024
Natranaerobiales Mesbah et al. 2007
Class "Halanaerobiia" Cavalier-Smith 2020
"Anoxybacterales" Pallen, Rodriguez-R & Alikhan 2022 {DY22613}
Halanaerobiales corrig. Rainey & Zhilina 1995
Halobacteroidales Chuvochina et al. 2024
Phylum Bacillota A
Class Thermosediminibacteria Chuvochina et al. 2024
Class "Thermoanaerobacteria"
Class "Clostridiia " Oren, Parte & Garrity 2016
"Thermoclostridiaceae" Pallen, Rodriguez-R & Alikhan 2022 {"Acetivibrionales" A}
Acetivibrionales Chuvochina et al. 2024
"Avimonoglobales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1381]
Caldicoprobacterales Chuvochina et al. 2024
Christensenellales Parks et al. 2018 ex Chuvochina et al. 2024 ("Borkfalkiales"; "Comantemales")
Clostridiales Prevot 1953 s.s. ("Plectridiales")?"Darwinibacteriales" Puchol-Royo et al. 2023 [MBA03]
"Egerieisomatales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1212]
Eubacteriales Buchanan 1917
Lachnospirales Chuvochina et al. 2024
Lutisporales Chuvochina et al. 2024
Mahellales Chuvochina et al. 2024
"Merdicolales" Pallen, Rodriguez-R & Alikhan 2022 [TANB77]
Monoglobales Chuvochina et al. 2024
"Oscillospirales" Glendinning et al. 2020
"Petroclostridiales" Pallen, Rodriguez-R & Alikhan 2022 [SK-Y3]
Peptostreptococcales Chuvochina et al. 2024
"Saccharofermentanales" corrig. Parks et al. 2018
Tissierellales Alauzet et al. 2020 Class Mollicutes Edward & Freundt 1967
Acholeplasmatales Freundt et al. 1984 (Anaeroplasmatales )
"Aphodocolales" Pallen, Rodriguez-R & Alikhan 2022
"Bathyoplasmales" corrig. Zhu, Lian & He 2020 [MAG-NZ]
"Caccosomales" (sic) Pallen, Rodriguez-R & Alikhan 2022 [RFN20]
Erysipelotrichales Ludwig et al. 2010 "Izemoplasmatales" corrig. Zheng et al. 2021
Mycoplasmatales Freundt 1955 ("Borrelomycetales"; "Anulomycetales"; "Paramycetales"; "Mollicutales"; "Pleuropneumoniales"; Entomoplasmatales , Mycoplasmoidales) Class "Bacillia " Cavalier-Smith 2020
Alicyclobacillales Chuvochina et al. 2024
Aneurinibacillales Chuvochina et al. 2024
"Bacillidae" Cavalier-Smith 2020 non Enderlein 1917
Bacillales_B
Bacillales_C
Bacillales_D
Bacillales_E
Bacillales_G
Bacillales_H
Bacillus marinisedimentorum Guo et al. 2018 {Bacillales_I:Bacillaceae_O}Sporolactobacillaceae Ludwig et al. 2010 {Bacillales_K}Bacillales Prevot 1953 s.s. (Caryophanales, "Caldibacillales")Aureibacillaceae Li et al. 2024 {DSM-28697}
Planococcaceae {Bacillales_A}"Bacillus thermozeamaize " Mak 2003 {Bacillales_F: Bacillaceae_M}
Brevibacillales Chuvochina et al. 2024
"Brockiales" Pallen, Rodriguez-R & Alikhan 2022
Caldalkalibacillales Chuvochina et al. 2024
Calditerricolales Chuvochina et al. 2024
Culicoidibacterales Neupane et al. 2020
Microaerobacter Khelifi et al. 2011 {DSM-22679: DSM-22679}Desulfuribacillales Sorokin et al. 2021
Exiguobacteriales Chuvochina et al. 2024
Haloplasmatales Rainey et al. 2008 non Zhou et al. 2022 "Harrysmithimonadales" Pallen, Rodriguez-R & Alikhan 2022 [CAJFEE01]
Kyrpidiales Chuvochina et al. 2024
Lactobacillales Ludwig, Schleifer & Whitman 2010 ("Plocamobacteriales"; "Coccales")
Paenibacillales Chuvochina et al. 2024
"Pasteuriales" Pallen, Rodriguez-R & Alikhan 2022 [RES148]
"Rubeoparvulales"
Staphylococcales Chuvochina et al. 2024
Tepidibacillales Chuvochina et al. 2024
Thermicanales Chuvochina et al. 2024
Thermoactinomycetales Chuvochina et al. 2024
Tumebacillales Chuvochina et al. 2024
Turicibacteraceae Verbarg et al. 2020 {MOL361} Class ?"Syntrophaliphaticia" corrig. Liu et al. 2020
Class "Geothermincolia" Jiao et al. 2021
"Geohydrothermomicrobiales" Pallen, Rodriguez-R & Alikhan 2022 [Fen-727]
"Geothermincolales" Jiao et al. 2021
Class "Humimicrobiia" Jiao et al. 2021
"Hakubellales" corrig. Merino et al. 2020
"Humimicrobiales" Jiao et al. 2021
Class "Aquicultoria" Jiao et al. 2021
"Aquicultorales" Jiao et al. 2021
"Geothermocultorales" Jiao et al. 2021
"Oleimmundimicrobiales" Pallen, Rodriguez-R & Alikhan 2022 [UBA3085]
"Subteraquimicrobiales" Jiao et al. 2021
Class Coriobacteriia König 2013
Anaerosomatales Khomyakova et al. 2023
Coriobacteriales Stackebrandt et al. 1997 (Eggerthellales)
Class Rubrobacteria Suzuki 2013
Rubrobacterales Rainey et al. 1997
Class Thermoleophilia Suzuki & Whitman 2013
Gaiellales Albuquerque et al. 2012
Miltoncostaeales Li et al. 2021
Thermoleophilales Reddy & Garcia-Pichel 2009 (Solirubrobacterales )
Class Acidimicrobiia Norris 2013
Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997
"Actinomarinales" Ghai et al. 2013
"Spongiisociales" corrig. Nguyen 2022
Class Nitriliruptoria Ludwig et al. 2013
Class Actinomycetia Salam et al. 2020
Acidothermales Sen et al. 2014
Actinomycetales Buchanan 1917 (Aquipuribacterales; Beutenbergiales; Bifidobacteriales ; Bogoriellales; Brevibacteriales; Cellulomonadales; Demequinales; Dermabacterales; Dermatophilales; Microbacteriales; Micrococcales ; Kineosporiales; Ruaniales)Jiangellales Tang et al. 2015
Motilibacterales Salam et al. 2020
Mycobacteriales Janke 1924 (Corynebacteriales; Actinocatenisporales; Actinoplanetales; Actinopolysporales; Antricoccales; Cryptosporangiales; Frankiales ; Geodermatophilales ; Glycomycetales; Jatrophihabitantales; Micromonosporales; Nakamurellales; Phytomonosporales; Pseudonocardiales)"Nanopelagicales" Neuenschwander et al. 2018
Propionibacteriales Patrick & McDowell 2015 Sporichthyales Nouioui et al. 2018
Streptomycetales Kampfer 2015 (Catenulisporales , Kitasatosporales)Streptosporangiales Goodfellow 2015
Clade Cyanoprokaryota
Class "Saganbacteria" Carnevali et al. 2018 (WOR1)
Class "Marinamargulisbacteria" Carnevali et al. 2019
Class "Riflemargulisbacteria" Carnevali et al. 2019 (GWF2_35_9)
Class "Termititenacia" Utami et al. 2019
"Termititenacales" Utami et al. 2019 Class "Sericytochromatia" Soo et al. 2017
S15B-MN24 ["Sericytochromatia"; "Tanganyikabacteria"]
UBA7694 ["Blackallbacteria"]
Class Vampirovibrionia Chuvochina et al. 2024
"Caenarcaniphilales" Soo et al. 2014
"Gastranaerophilales" Di Rienzi et al. 2013
"Obscuribacterales" Soo et al. 2014
Vampirovibrionales Chuvochina et al. 2024
Class Gloeobacteria Cavalier-Smith 2002
Class Phycobacteria Cavalier-Smith 2002
Acaryochloridales Miyashita et al. 2003 ex Strunecký & Mareš 2022 ("Thermosynechococcales")
?Aegeococcales Strunecký & Mareš 2022
Trichothermofontia Daroch et al. 2023 {B231}Cyanobacteriales Rippka & Cohen-Bazire 1983 (Chamaesiphonales, Chroococcales , Chroococcidiopsidales , Coleofasciculales, Desertifilales, Nostocales , Oscillatoriales , Pleurocapsales , Spirulinales , Stigonematales)
?"Eurycoccales"
?Geitlerinematales Strunecký & Mareš 2022
Gloeoemargaritales Moreira et al. 2016
Leptolyngbyales Strunecký & Mareš 2022
"Limnotrichales"
Neosynechococcales Chuvochina et al. 2024
Nodosilineales Strunecký & Mareš 2022 (Phormidesmidales)
Oculatellales Strunecký & Mareš 2022 (Elainellales)
Prochlorococcaceae Komárek & Strunecky 2020 {"PCC-6307"}
Prochlorotrichales Strunecký & Mareš 2022 [PCC-9006]
Pseudanabenales Hoffmann, Komárek & Kastovsky 2005
Synechococcales Hoffmann, Komárek & Kastovsky 2005 Thermostichales Komárek & Strunecký 2020
Kingdom Thermotogati
Class Atribacteria Katayama et al. 2021 (OP9)
Atribacterales Katayama et al. 2021 ("Caldatribacteriales")
Class "Phoenicimicrobiia" Jiao et al. 2024 (JS1)
"Phoenicimicrobiales" Jiao et al. 2024 (SB-45)
Phylum Synergistota
Phylum Dictyoglomerota
Class Dictyoglomeria corrig. Patel 2012
Dictyoglomerales corrig. Patel 2012
Class "Thermodesulfobiia" Frolov et al. 2022
"Thermodesulfobiales" Cavalier-Smith 2020
Phylum Caldisericota
Class Caldisericia Mori et al. 2009 (OP5)
Caldisericales Mori et al. 2009
"Cryosericales" Martinez et al. 2019 Class "Thermotogia " Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
Mesoaciditogales Itoh et al. 2016
Petrotogales Bhandari & Gupta 2014 (Kosmotogales)
Thermotogales Reysenbach 2002 emend. Bhandari & Gupta 2014
Clade Candidate Phyla Radiation
Class "Elulimicrobiia" Rodriguez-R et al. 2020
?"Elulimicrobiales" Rodriguez-R et al. 2020
Class "Wirthbacteria "
Class "Dojkabacteria" (WS6)
Class "Katanobacteria " (WWE3)
Class "Microgenomatia"
Clade GWA2-44-7
"Chazhemtobacteriales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1400]
"Curtissbacterales"
"Daviesbacterales"
"Gottesmanbacterales"
"Levybacterales"
"Roizmanbacterales"
"Shapirobacterales"
"Woykebacterales" (RIF34)
Class "Absconditabacteria"
"Absconditabacterales" (sic)Yakimov et al. 2022 (SR1)
"Candidatus Altimarinus" Rinke et al. 2013 {BD1-5: UBA6164} (GN02)
Class "Gracilibacteria "
"Abawacabacterales" (RIF46)
"Fertabacterales" (DOLZORAL124_38_8; "Fallacibacteriota")
"Peregrinibacterales" (PER)
"Peribacterales" Anantharaman et al. 2016
Class "Berkelbacteria " (ACD58)
Class "Kazanbacteria" (Kazan)
Class "Howlettbacteria" (CPR2)
Class "Saccharimonadia" corrig. Lemos et al. 2019 (TM7)
"Saccharimonadales" corrig. Lemos et al. 2019 ex Chuvochina et al. 2023
Class "Andersenbacteria" (RIF9)
Class "Doudnabacteria" (SM2F11)
Class "Torokbacteria" (GCA-2792135)
Class "ABY1"
?"Brownbacterales"
"Buchananbacterales" (RIF37)
"Falkowbacterales"
"Jacksonbacterales" (RIF38)
"Kerfeldbacterales" (RIF4)
"Komeilibacterales" (RIF6)
"Kuenenbacterales"
"Magasanikbacterales"
"Moisslbacterales" [UBA2591]
"Uhrbacterales"
"Veblenbacterales" (RIF39)
Class "Paceibacteria" Chuvochina et al. 2023
"Azambacterales"
Clade UBA6257
"Giovannonibacterales" (UBA11713)
?"Montesolbacterales"
"Moranbacterales" (OD1-i)
"Niyogibacterales" (RIF11; HO2-45-28)
"Paceibacterales" Chuvochina et al. 2023
"Parcunitrobacterales" Castelle et al. 2017
"Portnoybacterales" (RIF22)
"Ryanbacterales" (RIF10)
"Spechtbacterales" (RIF19)
"Sungbacterales" (RIF17)
"Tagabacterales" (RIF12)
"Terrybacterales" (RIF13)
"Yanofskybacterales" (2-02-FULL-40-12)
Clade
Kingdom Fusobacteriati
Class "Muiribacteriia" corrig. Chuvochina et al. 2023
"Muiribacteriales" corrig. Chuvochina et al. 2023
Class "Ozemibacteria" corrig. Kadnikov et al. 2018 (RIF32/ACD39)
"Ozemibacterales" corrig. Kadnikov et al. 2018
Class "Macinerneyibacteriia" corrig. Yadav et al. 2020
"Macinerneyibacteriales" corrig. Yadav et al. 2020 Class Fusobacteriia corrig. Staley & Whitman 2012
Fusobacterales Staley & Whitman 2012 ("Bactepneumoniales")
Clade
Class "Bipolaricaulia" Chuvochina et al. 2023
"Bipolaricaulales" Chuvochina et al. 2023 (KB1 group, OP1)
"Fraserbacterales" [GTDB tag: RIF31; RBG-16-55-9] "Deinococcia" Cavalier-Smith 2020
Clade
"Candidatus Cellulosimonas" Doud et al. 2020 Class "Elusimicrobiia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020 (TG1)
Elusimicrobiales Geissinger et al. 2010
"Obscuribacteriales" Uzun et al. 2023
Class "Endomicrobiia" Stingl et al. 2018
"Endomicrobiales" Zheng et al. 2018
Class "Aerophobia" Chuvochina et al. 2023 (CD12)
"Aerophobales" Chuvochina et al. 2023
Class "Ancaeobacteria" Williams et al. 2022 [JAKLEM01]
"Ancaeobacterales" Williams et al. 2022
Class "Auribacteria" Williams et al. 2022 [SURF-26]
"Auribacterales" Williams et al. 2022
Class "Erginobacteria" Williams et al. 2022 [PUNC01]
"Erginobacterales" Williams et al. 2022
Class JACPWU01
"Theseobacterales" Williams et al. 2022
Class "Tritonobacteria" Williams et al. 2022 [UBA1439]
"Tritonobacterales" Williams et al. 2022
Class "Omnitrophia" (OP3)
Class "Velamenicoccia" Pallen, Rodriguez-R & Alikhan 2022 [Koll11]
"Aquitaenarimonadales" Seymour et al. 2022
"Aquiviventales" Seymour et al. 2022
"Duberdicusellales" Seymour et al. 2022
"Ghiorseimicrobiales" Seymour et al. 2022
"Gorgyraeales" Seymour et al. 2023 [UBA10183]
"Gygaeellales" Seymour et al. 2023 [GIF10]
"Candidatus Orphnella" Williams et al. 2021 {JABMRG01: JABMRG01}
"Kaelpiales" Seymour et al. 2022 [4484-49]
"Kappaeales" Seymour et al. 2022
"Pluralincolimonadales" Seymour et al. 2022
"Taenaricolales" Seymour et al. 2022
"Tantalellales" Seymour et al. 2022 [SKK-01]
"Velamenicoccales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1572]
"Velesiimonadales" Seymour et al. 2022
"Zapsychrales" Seymour et al. 2022
Clade Spirochaetobacteriobiontes
Class "Babeliae" (sic) Yeoh et al. 2016 (TM6)
"Babelales" corrig. Yeoh et al. 2016
Phylum Spirochaetota
Class Leptospiria Chuvochina et al. 2024
Leptospirales corrig. Gupta et al. 2014
Turneriellales Chuvochina et al. 2024
Class Brevinematia Chuvochina et al. 2024
Brevinematales Gupta et al. 2014
Class Brachyspiria Chuvochina et al. 2024
Brachyspirales corrig. Gupta et al. 2014
Class "Exilispiria" Pallen, Rodriguez-R & Alikhan 2022
"Exilispirales" Pallen, Rodriguez-R & Alikhan 2022
Class Spirochaetia Paster 2020
?Spirochaetales Buchanan 1917
Borreliales Chuvochina et al. 2024
Spirochaeta cellobiosiphila Breznak & Warnecke 2008 {DSM-17781: DSM-17781}"Entomospirales" Pallen, Rodriguez-R & Alikhan 2022 [WRBN01]
"Marispirochaetales" Pallen, Rodriguez-R & Alikhan 2022 [JC444]
"Salinispirales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-27196]
"Sediminispirochaetales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-16054]
Sphaerochaetales Chuvochina et al. 2024
Spirochaeta thermophila Aksenova et al. 1992 {Spirochaetales_A}Spirochaetales_E
Treponematales Chuvochina et al. 2024
Clade Planctobacteria
Class "Uabimicrobiia" Lodha, Narvekar & Karodi 2021
"Uabimicrobiales" Lodha, Narvekar & Karodi 2021
Class "Brocadiia" JLodha, Narvekar & Karodi 2021
"Brocadiales" Jetten et al. 2010
"Hypogeohydatales" Wu et al. 2023 [YC14-17: JP1]
"Wukongales" Wu et al. 2023 [YC18]
Class Phycisphaeria Oren, Parte & Garrity 2016
Phycisphaerales Fukunaga et al. 2010
Sedimentisphaerales Spring et al. 2018 Tepidisphaerales Kovaleva et al. 2015
Class Planctomycetia Ward 2020
Class Chlamydiia Horn 2011
"Similichlamydiales" Pallen, Rodriguez-R & Alikhan 2022 [Hat2]
Chlamydiales Storz & Page 1971 em. Everett et al. 1999 (Parachlamydiales, "Anoxychlamydiales", "Simkaniales") Class Lentisphaeria Cho et al. 2004
Lentisphaerales Cho et al. 2004
Oligosphaerales Qiu et al. 2013
Victivallales Cho et al. 2004
Class Kiritimatiellae Spring et al. 2017
Kiritimatiellales Spring et al. 2017 [incl. Tichowtungiales]
"Spyradenecales" Pallen, Rodriguez-R & Alikhan 2022 [RFP12]
Class Verrucomicrobiia corrig. Hedlund, Gosink & Staley 1998
Limisphaerales Podosokorskaya et al. 2023
"Methylacidiphilales" Op den Camp 2009 ["Pedosphaerales"]
Opitutales Choo et al. 2007 (Puniceicoccales)
Terrimicrobiales García-López et al. 2020 ("Chthoniobacterales")
Verrucomicrobiales Ward-Rainey et al. 1996 em. Yoon et al. 2008
Clade
Class "Saltatorellae" Wiegand et al. 2019
?"Saltatorellales" Wiegand et al. 2019
Class "Hinthialibacteria" Williams et al. 2022
"Hinthialibacterales" Williams et al. 2022 (OLB16)
Class "Sumerlaeia" Kadnikov et al. 2018
"Sumerlaeales" Kadnikov et al. 2018
Class ?"Entoporibacteria" Podell et al. 2019
Class ?"Pelagiporibacteria" Podell et al. 2019
Class "Hydrogenedentia" Chuvochina et al. 2023 (NKB19)
"Hydrogenedentales" corrig. Chuvochina et al. 2023
Clade FCB group
Class "Heilongiia" corrig. Zhang et al. 2022
?"Heilongiales" Zhang et al. 2022
?"Candidatus Neomarinimicrobium" Rinke et al. 2013 corrig. Oren et al. 2020 (Candidate phylum SAR406; candidate phylum Marine Group A)
Class Fidelibacteria Katayama et al. 2024
?Fidelibacterales Katayama et al. 2024
?"Candidatus Tianyaibacterium" corrig. Cui et al. 2021
Class "Fermentibacteria " Kirkegaard 2016 ("Aegiribacteria")
"Fermentibacterales" Kirkegaard 2016 (Hyd24-12)
Class "Handelsmanbacteria" (RIF27)
Class "Latescibacteria" Chuvochina et al. 2023
"Latescibacterales" Chuvochina et al. 2023 (WS3)
Family "Effluvivivacaceae" corrig. Su et al. 2024 (VGIX01)
Class "Krumholzibacteriia" corrig. Youssef et al. 2019
"Delphibacterales " (DOLZORAL124_64_63; LZORAL124-64-63)
"Krumholzibacteriales" Youssef et al. 2019 (UBP1) Class "Glassbacteria" (RIF5)
Class Gemmatimonadetes Zhang et al. 2003
Gemmatimonadales Zhang et al. 2003
Longimicrobiales Pascual et al. 2016
"Palaucibacterales" Aldeguer-Riquelme, Antón & Santos 2022 [PAUC43f]
Class "Stahliibacteriia" (UBA3073)
Class "Hydrothermia" Chuvochina et al. 2019 ex Chuvochina et al. 2023
"Hydrothermales" Chuvochina et al. 2019 ex Chuvochina et al. 2023 (EM3)
"Caldipriscales" Pallen, Rodriguez-R & Alikhan 2022 [LBFQ01]
Class "Cloacimonadia" Williams et al. 2021 ex Chuvochina et al. 2023
"Candidatus Celaenobacter" Williams et al. 2021 {JGIOTU-2: JGIOTU-2}
"Cloacimonadales" Williams et al. 2021 ex Chuvochina et al. 2023 (WWE1) Class "Raymondbacteria" (RIF7; OXYB2-FULL-49-7)
Class Chitinivibrionia Sorokin et al. 2014
Chitinivibrionales Sorokin et al. 2014 ["Chitinispirillales"]
Class Fibrobacteria Spain et al. 2012
Fibrobacterales Spain et al. 2012 ["Fibromonadales"]
Class "Electryoneia" Williams et al. 2022
Electryoneales Williams et al. 2022
Class AABM5-125-24
Hatepunaeales Williams et al. 2022
Class "Tariuqbacteria" Vigneron, Vincent & Lovejoy 2023
?Tariuqbacterales Vigneron, Vincent & Lovejoy 2023
Class "Marinisomatia"
"Marinisomatales" (SAR406) Class Calditrichia Kublanov et al. 2022
Class "Cosmopolitia" (sic) Zhang et al. 2023
"Cosmopoliales" Zhang et al. 2023 (SAR406)
Class "Zhuqueibacteria" Lian et al. 2024 [KSB1: UBA2214]
"Oceanimicrobiales" Lian et al. 2024 [CR04bin15]
"Oleimicrobiales" Lian et al. 2024 [JACIZP01]
"Residuimicrobiales" Lian et al. 2024 [UBA2214]
"Sulfurfontimicrobiaceae" Lian et al. 2024 {JAFGMA01}
"Thermofontimicrobiales" Lian et al. 2024 [AABM5-25-91]
"Zhuqueibacterales" Lian et al. 2024 [DRLW01] Class "Kapaibacteriia" corrig. Chuvochina et al. 2023 (OPB56)
"Kapaibacteriales" corrig. Chuvochina et al. 2023
Class "Kryptonia "
Class "Ignavibacteriia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2022
Ignavibacteriales Iino et al. 2010
Class Chlorobiia Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
Chlorobiales Gibbons & Murray 1978
Class Rhodothermia Munoz, Rossello-Mora & Amann 2017
Balneolales Munoz, Rossello-Mora & Amann 2017
Rhodothermales Munoz, Rossello-Mora & Amann 2017
Class Bacteroidia Krieg 2012
Bacteroidales Krieg 2012 [Marinilabiliales; "Sulfidibacteriales"]Chitinophagales Munoz, Rossello-Mora & Amann 2017 [Saprospirales]
Cytophagales Leadbetter 1974 [Cyclobacteriales]"Amoebophilaceae" Santos-Garcia et al. 2014 {Cytophagales_A}
Flavobacteriales Bernardet 2012 Blattabacteriaceae Kambhampati 2012 {Flavobacteriales_B}
Sphingobacteriales Kämpfer 2012
Class "Canglongiliia" Zhang et al. 2022
?"Canglongiales" Zhang et al. 2022 Class "Fischerbacteria" (RIF25; HRBIN11)
Class "Guanabaribacteriia" corrig. Tschoeke et al. 2020
"Guanabaribacteriales" corrig. Tschoeke et al. 2020
Class "Aminicenantia" Chuvochina et al. 2023
"Aminicenantales" Kadnikov et al. 2019 ex Chuvochina et al. 2023 (OP8)
Class Thermoanaerobaculia Dedysh & Yilmaz 2018
"Multivorales" Nguyen 2022
Thermoanaerobaculales Dedysh & Yilmaz 2018
Class "Holophagia" Oren, Parte & Garrity 2016
Class "Polarisedimenticolia" Flieder et al. 2021
"Polarisedimenticolales" Flieder et al. 2021
Class Vicinamibacteria Dedysh & Yilmaz 2018
"Marinacidobacterales" Nguyen 2022
Vicinamibacterales Dedysh & Yilmaz 2018
Class Blastocatellia Pascual et al. 2016
?"Frugalibacteriales" Ruhl et al. 2022
Blastocatellales Pascual et al. 2016
"Chloracidobacteriales"
Class Acidobacteriia Thrash & Coates 2010
Acidobacteriales Cavalier-Smith 2002 [Terriglobales]
"Acidoferrales" Epihov et al. 2021
Bryobacterales Dedysh & Yilmaz 2018 ["Solibacterales"]
"Versatilivorales" Nguyen 2022
Class "Moduliflexia" Sekiguchi et al. 2015 (KSB3)
"Moduliflexales" Sekiguchi et al. 2015
Class "Methylomirabilia" Chuvochina et al. 2023
"Methylomirabilales" Cabrol et al. 2020 ex Chuvochina et al. 2023
"Rokubacteriales" (CSP1-6)
Class "Entotheonellia" Chuvochina et al. 2023
"Entotheonellales" Schmidt et al. 2000 ex Chuvochina et al. 2023 Class Nitrospinia Lucker et al. 2022
Nitrospinales Lucker et al. 2022 Class Thermodesulfovibrionia Umezawa et al. 2023
?"Mariimomonadales" Yoon et al. 2023
Thermodesulfovibrionales Umezawa et al. 2023 ["Magnetobacteriales"]
Class Nitrospiria Garrity & Holt 2022
Nitrospirales Garrity & Holt 2022
"Troglogloeales" Yu et al. 2022 ["Manganitrophales"]
Phylum SAR324
Class Lambdaproteobacteria Anantharaman et al. 2016 (RIF24) Class Oligoflexia Nakai et al. 2014
Class Bdellovibrionia Waite et al. 2020
Class Bacteriovoracia Waite et al. 2020
Bacteriovoracales Hahn et al. 2017
Class "Binatia" Chuvochina et al. 2019 ex Chuvochina et al. 2023
"Binatales" Chuvochina et al. 2019 ex Chuvochina et al. 2023
Class Deferrisomatia Waite et al. 2020
Deferrisomatales Waite et al. 2020
Class "Lernaellia" Williams et al. 2022 [FEN-1099]
"Alcyoniellaceae" Williams et al. 2022 {JAVCCG01}
"Lernaellales" Williams et al. 2022
Phylum Myxococcota
Class "Kuafubacteriia" corrig. Li et al. 2023
"Kuafubacteriales" Li et al. 2023 [WYAZ01: GCA_016703535]
Class Myxococcia Waite et al. 2020
Myxococcales Tchan, Pochon & Prévot 1948 [Archangiales; "Angiobacteriales"; "Angiococcales"] (fruiting gliding bacteria)
Class Bradymonadia corrig. Chuvochina et al. 2024
Bradymonadales Wang et al. 2015
Class Polyangiia corrig. Waite et al. 2020
Haliangiales Waite et al. 2020
Nannocystales (Reichenbach 2007) Waite et al. 2020
Polyangiales Tchan, Pochon & Prevot 1948 [Myxobacterales]
?Candidatus "Nitrosediminicola" Zhao, Jorgensen & Babbin 2024
Class "Deferrimicrobiia" corrig. Begmatov et al. 2022
Deferrimicrobiales Begmatov et al. 2022 Class "Zymogeniia" corrig. Murphy et al. 2021
"Zymogeniales" Murphy et al. 2021
Class "Anaeroferrophilia" corrig. Murphy et al. 2021
"Anaeroferrophilales" Murphy et al. 2021 ["Tharpellales"]
Class Desulfuromonadia Waite et al. 2020
Class Desulfomonilia Waite et al. 2020
Desulfomonilales Waite et al. 2020
Class Syntrophia Waite et al. 2020
Syntrophales Waite et al. 2020
Class Dissulfuribacteria Waite et al. 2020
Dissulfuribacterales Waite et al. 2020
Class Thermodesulfobacteriia corrig. Hatchikian, Ollivier & Garcia 2002
Thermodesulfobacteriales Hatchikian, Ollivier & Garcia 2002
Class Desulfobulbia Waite et al. 2020
Desulfobulbales Waite et al. 2020
Class "Desulfofervidia" Waite et al. 2020
"Desulfofervidales" Waite et al. 2020
Class "Desulfatiglandia" Pallen, Rodriguez-R & Alikhan 2022 [DSM-4660]
Desulfatiglandales Waite et al. 2020
Class Desulfovibrionia Waite et al. 2020
Class Desulfobaccia Waite et al. 2020
Desulfobaccales Waite et al. 2020
Class Desulfarculia Waite et al. 2020
"Adiutricales" Waite et al. 2020
Desulfarculales corrig. Kuever, Rainey & Widdel 2006
Class Syntrophobacteria Waite et al. 2020
Class Desulfobacteria Waite et al. 2020
Phylum Desulfobacterota G
Class Syntrophorhabdia Waite et al. 2020
Syntrophorhabdales Waite et al. 2020
Class "Dadabacteria" (sic) Hug et al. 2016 [CSP1-2]
"Nemesobacterales" Gavriilidou et al. 2023
Class "Acidulodesulfobacteriia" (sic) Pallen, Rodriguez-R & Alikhan 2022 [SZUA-79]
"Acidulidesulfobacterales" corrig. Tan et al. 2019 Class Chrysiogenetes Garrity & Holt 2002
Chrysiogenales Garrity & Holt 2002
Phylum Deferribacterota
Class Deferribacteres Huber & Stetter 2002 em. Jumas-Bilak et al. 2009
Deferribacterales Huber & Stetter 2002 ["Geovibriales"]
Phylum Thermosulfidibacterota
Class Thermosulfidibacteria Cavalier-Smith 2020 ex Chuvochina et al. 2024
Thermosulfidibacterales Cavalier-Smith 2020 ex Chuvochina et al. 2024 Class Desulfurobacteriia Chuvochina et al. 2024
Desulfurobacteriales Gupta & Lali 2014
Class Aquificia corrig. Reysenbach 2002
Aquificales Reysenbach 2002
Hydrogenothermales Chuvochina et al. 2024
Class "Calescibacteriia" Chuvochina et al. 2023 (EM19)
"Calescibacteriales" Chuvochina et al. 2023
Phylum Campylobacterota_A
Class Desulfurellia Waite et al. 2020
Desulfurellales Kuever, Rainey & Widdel 2006 Class "Campylobacteria" Oren, Parte & Garrity 2016 ex Waite et al. 2017
Campylobacterales Garrity, Bell & Lilburn 2006 Nautiliales Miroshnichenko et al. 2004
Class "Leptospirillia" Chuvochina et al. 2023
"Leptospirillales" Chuvochina et al. 2023 Class "Anaeropigmentatia" corrig. Murphy et al. 2021
?Anaeropigmentatales corrig. Murphy et al. 2021
Class Caulobacteria " Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
?"Futianiales" Liu et al. 2022
?"Methylospongiales" Podell et al. 2020
Holosporales_A
Holosporales Szokoli et al. 2016 "Paracaedibacterales" Chuvochina et al. 2023
Rickettsiales_A
Sublass "Rickettsiidae" corrig. Ferla et al. 2013
"Enterousiales" Pallen, Rodriguez-R & Alikhan 2022 {Rs-D84}
"Pelagibacterales " Grote et al. 2012
Rickettsiales Gieszczykiewicz 1939 emend. Dumler et al. 2001 Sublass "Caulobacteridae" Ferla et al. 2013
Acetobacterales Chuvochina et al. 2024
"Caedimonadales"
Azospirillales Chuvochina et al. 2024
Caulobacterales Henrici & Johnson 1935 (Hyphomonadales; Maricaulales; Parvularculales)Dongiales Chuvochina et al. 2024
Elsterales Chuvochina et al. 2024
Ferrovibrionales Chuvochina et al. 2024
Geminicoccales Chuvochina et al. 2024
Hyphomicrobiales Douglas 1957 (Rhizobiales )"Inquilinales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-16000]
Kiloniellales Wiese et al. 2009
"Marivibrionales" Pallen, Rodriguez-R & Alikhan 2022
"Methylospongiales" Podell et al. 2020
"Micavibrionales"
Micropepsales Harbison et al. 2016
Minwuiales Sun et al. 2018
Oceanibaculales Chuvochina et al. 2024
Parvibaculales Chuvochina et al. 2024
"Planktothermales" Zhou et al. 2020 [UBA7887]
Puniceispirillales Chuvochina et al. 2024
Reyranellales Chuvochina et al. 2024
Rhodobacterales Garrity, Bell & Lilburn 2006 Rhodospirillales ARhodospirillales Pfennig & Truper 1971 "Scatocolales" Pallen, Rodriguez-R & Alikhan 2022 [RF32]
Sphingomonadales Yabuuchi & Kosako 2006 (Emcibacterales; Iodidimonadales; Kordiimonadales; Rhodothalassiales)Sneathiellales Kurahashi et al. 2008
Stellales Pallen, Rodriguez-R & Alikhan 2022 [ATCC43930]
"Tagaeales" Pallen, Rodriguez-R & Alikhan 2022 [CACIAM-22H2]
Thalassobaculales Chuvochina et al. 2024
Tistrellales Chuvochina et al. 2024
Zavarziniales Chuvochina et al. 2024 Class "Mariprofundia" Cavalier-Smith 2020 ["Zetaproteobacteria"]
Mariprofundales Makita et al. 2017
Class Magnetococcia Chuvochina et al. 2024
Class Pseudomonadia " Oren, Parte & Garrity 2016
?"Eutrophobiales" Weiss et al. 2007
?"Ferritrophicales" Weiss et al. 2007
?"Kopriimonadales" Kwon et al. 2005c
?"Siderophilales" corrig. Corbera-Rubio et al. 2024
?"Spongiifermentales" Nguyen et al. 2023
Subclass "Neisseriidae" Cavalier-Smith 2020 (Betaproteobacteria )
Subclass "Pseudomonadidae" Cavalier-Smith 2020
Acidiferrobacterales Kojima, Shinohara & Fukui 2015
Acidithiobacillales Garrity, Bell & Lilburn 2005 "Aquicellales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-16500]
Arenicellales Teramoto, Yagyu & Nishijima 2015
Beggiatoales Buchanan 1957
"Berkiellales" Chuvochina et al. 2023
Cardiobacteriales Garrity, Bell & Lilburn 2005
Chromatiales Imhoff 2005
"Comchoanobacterales" Needham et al. 2022
"Competibacterales" Chuvochina et al. 2023
Coxiellales Chuvochina et al. 2024
Diplorickettsiales" Chuvochina et al. 2024
Acidihalobacteraceae Chuvochina et al. 2024 {DSM-5130}
Ectothiorhodospirales Chuvochina et al. 2024
Enterobacterales Adeolu et al. 2016 ("Bacteriales"; Orbales ,"Johnevansiales"; "Aerobacterales"; Aeromonadales ; Alteromonadales ; Kangiellales; Pasteurellales; "Vibrionales ")"Foliamicales" Nguyen et al. 2023
Francisellales Chuvochina et al. 2024
Granulosicoccales Chuvochina et al. 2024
"Halofilales" Pallen, Rodriguez-R & Alikhan 2022 [XJ16]
Halothiobacillales Chuvochina et al. 2024
Immundisolibacterales Corteselli, Aitken & Singleton 2017
"Inmiraniales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-100275]
Sulfurivermis Kojima, Watanabe & Fukui 2017 {JG42: JG42}Legionellales Garrity, Bell & Lilburn 2005 "Macondimonadales" Pallen, Rodriguez-R & Alikhan 2022 [UBA5335]
"Magnimaribacterales" Ramfelt et al. 2024 [SAR86: SAR156]
Methylococcales Bowman 2005
Methylohalomonadales Sorokin & Merkel 2023
Natronospirales Sorokin et al. 2025 {SLND01: SLND01}
Nevskiales Naushad et al. 2015 ("Salinisphaerales")
Nitrococcales Chuvochina et al. 2024
Nitrosococcales Chuvochina et al. 2024
"Pelagibaculales" Pallen, Rodriguez-R & Alikhan 2022 [HP12]
Piscirickettsiales Chuvochina et al. 2024
"Porifericomitales" Nguyen et al. 2023
"Poriferisulfidales" Nguyen et al. 2023 ex Chuvochina et al. 2023
Pseudomonadales Orla-Jensen 1921 (Cellvibrionales ; Moraxellales; Oceanospirillales )"Rariloculales" Nguyen et al. 2022
"Reidiellales" Pallen, Rodriguez-R & Alikhan 2022 [GCF-013343005]
"Riflewellaceae" Zhou et al. 2020 {UBA4486}
Steroidobacterales Chuvochina et al. 2024
"Sulfuriflexales" Pallen, Rodriguez-R & Alikhan 2022 [AKS1]
"Taraoceanobacteraceae" Zhou et al. 2020 {UBA11654}
"Tenderiales" Chuvochina et al. 2023
"Thioalbales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-26407]
"Thioglobales" Pallen, Rodriguez-R & Alikhan 2022 [PS1]
"Thiogranales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-19610]
Thiohalobacterales Sorokin & Merkel 2023
Thiohalomonadales Sorokin & Merkel 2023
"Thiohalophilales" Pallen, Rodriguez-R & Alikhan 2022 {UBA6429}
Thiohalorhabdales Sorokin & Merkel 2023
Thiohalospirales Sorokin & Merkel 2023
Thiomicrospirales Chuvochina et al. 2024
"Thiopontiales" Pallen, Rodriguez-R & Alikhan 2022 [GCF-002020875]
Thiotrichales Garrity, Bell & Lilburn 2005 Woeseiales Chuvochina et al. 2024
Xanthomonadales Saddler & Bradbury 2005 non Chadefaud 1950a (Lysobacterales)
List of Candidate Phyla
"Qinglongiota" Zhang et al. 2022
"Salinosulfoleibacteria" Tazi et al. 2006
"Teskebacteria" Dojka 1998 (WS1)
See also
References
↑ J.P. Euzéby. "Bacteria" . List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/domain/bacteria . ↑ Sayers. "Bacteria" . National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2 . ↑ All-Species Living Tree Project."16S rRNA-based LTP release 132" . Silva Comprehensive Ribosomal RNA Database. https://itol.embl.de/tree/37201229170412631528207598 .
↑ Parks, DH; Chuvochina, M; Waite, DW; Rinke, C; Skarshewski, A; Chaumeil, PA; Hugenholtz, P (November 2018). "A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life.". Nature Biotechnology 36 (10): 996–1004. doi :10.1038/nbt.4229 . PMID 30148503 . ↑ Parks, DH; Chuvochina, M; Chaumeil, PA; Rinke, C; Mussig, AJ; Hugenholtz, P (September 2020). "A complete domain-to-species taxonomy for Bacteria and Archaea." . Nature Biotechnology 38 (9): 1079–1086. doi :10.1038/s41587-020-0501-8 . PMID 32341564 . https://www.researchgate.net/publication/340954053 . ↑ Chaumeil, PA; Mussig, AJ; Hugenholtz, P; Parks, DH (15 November 2019). "GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database." . Bioinformatics 36 (6): 1925–1927. doi :10.1093/bioinformatics/btz848 . PMID 31730192 . ↑ Almeida, Alexandre; Nayfach, Stephen; Boland, Miguel; Strozzi, Francesco; Beracochea, Martin; Shi, Zhou Jason; Pollard, Katherine S.; Sakharova, Ekaterina et al . (20 July 2020). "A unified catalog of 204,938 reference genomes from the human gut microbiome" . Nature Biotechnology 39 (1): 105–114. doi :10.1038/s41587-020-0603-3 . PMID 32690973 . ↑ Nayfach, Stephen et al . (9 November 2020). "A genomic catalog of Earth's microbiomes" . Nature Biotechnology 39 (4): 499–509. doi :10.1038/s41587-020-0718-6 . PMID 33169036 . ↑ 9.00 9.01 9.02 9.03 9.04 9.05 9.06 9.07 9.08 9.09 9.10 9.11 9.12 9.13 9.14 9.15 9.16 9.17 9.18 9.19 9.20 9.21 9.22 9.23 9.24 9.25 9.26 9.27 9.28 9.29 9.30 9.31 9.32 9.33 9.34 9.35 9.36 "GTDB release 09-RS220" . https://gtdb.ecogenomic.org/about#4%7C . ↑ 10.00 10.01 10.02 10.03 10.04 10.05 10.06 10.07 10.08 10.09 10.10 10.11 10.12 10.13 10.14 10.15 10.16 10.17 10.18 10.19 10.20 10.21 10.22 10.23 10.24 10.25 10.26 10.27 10.28 10.29 10.30 10.31 10.32 10.33 10.34 10.35 10.36 "bac120_r220.sp_labels" . https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree . ↑ 11.00 11.01 11.02 11.03 11.04 11.05 11.06 11.07 11.08 11.09 11.10 11.11 11.12 11.13 11.14 11.15 11.16 11.17 11.18 11.19 11.20 11.21 11.22 11.23 11.24 11.25 11.26 11.27 11.28 11.29 11.30 11.31 11.32 11.33 11.34 11.35 11.36 "Taxon History" . https://gtdb.ecogenomic.org/taxon_history/ .
Original source: https://en.wikipedia.org/wiki/List of bacterial orders. Read more
