Biology:Gemmiger

From HandWiki

Gemmiger is a genus of bacteria from the family Oscillospiraceae.[1][2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4]

16S rRNA based LTP_10_2024[5][6][7] 120 marker proteins based GTDB 09-RS220[8][9][10]
Gemmiger

G. gallinarum

G. formicilis

Subdoligranulum variabile

Gemmiger

"Ca. G. faecavium" Gilroy et al. 2021

G. gallinarum Zenner et al. 2021

"Ca. G. faecigallinarum" Gilroy et al. 2

"Ca. G. stercorigallinarum" Gilroy et al. 2

"Ca. Cibionibacter qucibialis" corrig. Pasolli et al. 2019

"Ca. G. avicola" Gilroy et al. 2021

"Ca. G. stercoravium" Gilroy et al. 2021

"Ca. G. stercoripullorum" Gilroy et al. 2021

G. formicilis Gossling & Moore 1975

"Ca. G. avistercoris" Gilroy et al. 2021

"Ca. G. excrementipullorum" Gilroy et al. 2021

"Ca. G. excrementavium" Gilroy et al. 2021

"Ca. G. excrementigallinarum" Gilroy et al. 2021

Subdoligranulum variabile Holmstrøm et al. 2004

See also

References

  1. Cite error: Invalid <ref> tag; no text was provided for refs named G&M
  2. Yarza, Pablo; Spröer, Cathrin; Swiderski, Jolantha; Mrotzek, Nicole; Spring, Stefan; Tindall, Brian J. et al. (2013). "Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names" (in en). Systematic and Applied Microbiology 36 (1): 69–73. doi:10.1016/j.syapm.2012.12.006. ISSN 0723-2020. PMID 23410935. 
  3. A.C. Parte. "Gemmiger". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/gemmiger. 
  4. Sayers. "Gemmiger". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=204475&lvl=3&keep=1&srchmode=1&unlock. 
  5. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  6. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  7. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  8. "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  9. "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  10. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q19597278 entry