Biology:Acidiplasma
From HandWiki
Acidiplasma is a genus in the phylum Euryarchaeota (Archaea).[1]
Etymology
The name Acidiplasma derives from:
Neo-Latin neuter gender n acidum, an acid; Greek neuter gender noun plasma (πλάσμα), something shaped or moulded; Neo-Latin neuter gender noun Acidiplasma, an acid-living form.[1]
Species
The genus contains 2 species (including basonyms and synonyms), namely[1]
- A. aeolica Golyshina et al. 2009 (Type species of the genus) (Latin neuter gender adjective aeolicum, from the Aeolian archipelago, to which Vulcano Island belongs, where the type strain was isolated.)[2]
- A. cupricumulans (Hawkes et al. 2008) Golyshina et al. 2009 (Latin noun cuprum, copper; Latin participle adjective cumulans, heaping up, accumulating; Neo-Latin participle adjective cupricumulans, copper-accumulating.)[2]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[3]
| 16S rRNA based LTP_07_2026[4][5][6] | 53 marker proteins based GTDB 11-RS232[7][8][9] | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
See also
References
- ↑ 1.0 1.1 1.2 1.3 Acidiplasma in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research 53: D1–D12. doi:10.1093/nar/gkaf1110.
- ↑ 2.0 2.1 Golyshina, O. V.; Yakimov, M. M.; Lunsdorf, H.; Ferrer, M.; Nimtz, M.; Timmis, K. N.; Wray, V.; Tindall, B. J. et al. (2009). "Acidiplasma aeolicum gen. Nov., sp. Nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. Nov". International Journal of Systematic and Evolutionary Microbiology 59 (11): 2815–2823. doi:10.1099/ijs.0.009639-0. PMID 19628615.
- ↑ C.L. Schoch. "Acidiplasma". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?command=show&mode=tree&id=507753&lvl=3.
- ↑ "The LTPlus". https://bioinfo.uib.es/ltp/#LTPlus.
- ↑ "LTP_all tree in newick format". https://biocom.uib.es/opucheck-backend/api/releases/07_26_04.
- ↑ Rossello-Mora, Ramon; Viver, Tomeu; Palmer-Rodríguez, Pere; Westram, Ralf; Bustos-Caparros, Esteban; Gago, Joan Francisco; Gonzalez-Mendez, Jaime; Llabrés, Mercè et al. (22 April 2026). "A pipeline for improved 16S rRNA gene-based phylogeny and diversity analyses of Bacteria and Archaea" (in en). Nature Portfolio. doi:10.21203/rs.3.rs-9370187/v1. https://doi.org/10.21203/rs.3.rs-9370187/v1.
- ↑ "GTDB release 11-RS232". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "ar53_r232.sp_label". https://data.gtdb.ecogenomic.org/releases/release232/232.0/auxillary_files/ar53_r232.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Wikidata ☰ Q4674101 entry
 |  |
