Biology:Deferribacter
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Short description: Genus of bacteria
| Deferribacter | |
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Scientific classification 
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| Domain: | Bacteria |
| Phylum: | Deferribacterota |
| Class: | Deferribacteres |
| Order: | Deferribacterales |
| Family: | Deferribacteraceae |
| Genus: | Deferribacter Greene et al. 1997[1] |
| Type species | |
| Deferribacter thermophilus Greene et al. 1997
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| Species | |
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Deferribacter is a genus in the phylum Deferribacterota (Bacteria).[2]
Etymology
The name Deferribacter derives from:
Latin pref. de-, from; Latin noun ferrum, iron; Neo-Latin masculine gender noun, a rodbacter, nominally meaning "a rod", but in effect meaning a bacterium, rod; Neo-Latin masculine gender noun Deferribacter, rod that reduces iron.[3]
Species
The genus contains 4 species, namely[3]
- D. abyssi Miroshnichenko et al. 2003; (Latin genitive case noun abyssi, of immense depths, living in the depths of the ocean.)[4]
- D. autotrophicus Slobodkina et al. 2009; (Neo-Latin masculine gender adjective autotrophicus, autotrophic.)[5]
- D. desulfuricans Takai et al. 2003; (Neo-Latin participle adjective desulfuricans, reducing sulfur.)[6]
- D. thermophilus Greene et al. 1997 ((Type species of the genus).; Greek noun thermē (θέρμη), heat; Neo-Latin masculine gender adjective philus (from Greek masculine gender adjective φίλος), friend, loving; Neo-Latin masculine gender adjective thermophilus, heat loving.)[1]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[7] and National Center for Biotechnology Information (NCBI)[8]
| 16S rRNA based LTP_01_2022[9][10][11] | GTDB 07-RS207 by Genome Taxonomy Database[12][13][14] | ||||||||||||||||||||||||||||||
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See also
References
- ↑ 1.0 1.1 "Deferribacter thermophilus gen. nov., sp. nov., a Novel Thermophilic Manganese- and Iron-Reducing Bacterium Isolated from a Petroleum Reservoir -- GREENE et al. 47 (2): 505 -- International Journal of Systematic and Evolutionary Microbiology". http://ijs.sgmjournals.org/cgi/content/abstract/47/2/505.
- ↑ Classification of Genera DL entry in LPSN [Euzéby, J.P. (1997). "List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet". Int J Syst Bacteriol (Microbiology Society) 47 (2): 590–2. doi:10.1099/00207713-47-2-590. ISSN 0020-7713. PMID 9103655. https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/00207713-47-2-590. Retrieved 2019-02-23.]
- ↑ 3.0 3.1 Deferribacter entry in LPSN [Euzéby, J.P. (1997). "List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet". Int J Syst Bacteriol (Microbiology Society) 47 (2): 590–2. doi:10.1099/00207713-47-2-590. ISSN 0020-7713. PMID 9103655. https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/00207713-47-2-590. Retrieved 2019-02-23.]
- ↑ "Deferribacter abyssi sp. nov., an anaerobic thermophile from deep-sea hydrothermal vents of the Mid-Atlantic Ridge -- Miroshnichenko et al. 53 (5): 1637 -- International Journal of Systematic and Evolutionary Microbiology". http://ijs.sgmjournals.org/cgi/content/abstract/53/5/1637.
- ↑ Slobodkina, G. B.; Kolganova, T. V.; Chernyh, N. A.; Querellou, J.; Bonch-Osmolovskaya, E. A.; Slobodkin, A. I. (2009). "Deferribacter autotrophicus sp. Nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent". International Journal of Systematic and Evolutionary Microbiology 59 (6): 1508–1512. doi:10.1099/ijs.0.006767-0. PMID 19502344.
- ↑ "Deferribacter desulfuricans sp. nov., a novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent -- Takai et al. 53 (3): 839 -- International Journal of Systematic and Evolutionary Microbiology". http://ijs.sgmjournals.org/cgi/content/abstract/53/3/839.
- ↑ A.C. Parte. "Deferribacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/Deferribacter.
- ↑ Sayers. "Deferribacter". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=53572&lvl=3&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/Tree_LTP_all_01_2022.ntree.
- ↑ "LTP_01_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_01_2022_release_notes.pdf.
- ↑ "GTDB release 07-RS207". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "ar53_r207.sp_label". https://data.gtdb.ecogenomic.org/releases/release207/207.0/auxillary_files/ar53_r207.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Wikidata ☰ Q5251513 entry
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