Biology:Desulfobotulus

From HandWiki

Desulfobotulus is a Gram-negative, anaerobic, non-spore-forming and motile bacteria genus from the family of Desulfobacteraceae.[1][2][3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 10-RS226[9][10][11]
Desulfobotulus

D. sapovorans (Widdel 1981) Kuever, Rainey & Widdel 2009

D. alkaliphilus Sorokin et al. 2010

D. mexicanus Pérez-Bernal et al. 2020

D. pelophilus Frolova et al. 2024

Desulfobotulus

D. pelophilus

D. alkaliphilus

D. mexicanus

See also

References

  1. 1.0 1.1 Desulfobotulus in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research 53: D1–D12. doi:10.1093/nar/gkaf1110. 
  2. (in en) Desulfobotulus. http://ebi8.uniprot.org/taxonomy/48001. 
  3. Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). "Nomenclature Abstract for Desulfobotulus Kuever et al. 2009." (in en). The NamesforLife Abstracts. doi:10.1601/nm.3563. 
  4. Whitman, William B., ed (2015-09-14) (in en). Bergey's Manual of Systematics of Archaea and Bacteria (1 ed.). Wiley. doi:10.1002/9781118960608.gbm01014.pub2. ISBN 978-1-118-96060-8. https://onlinelibrary.wiley.com/doi/book/10.1002/9781118960608. 
  5. Schoch CL. "Desulfobotulus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?command=show&mode=tree&id=48001&lvl=3. Retrieved 2025-06-05. 
  6. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. "GTDB release 10-RS226". https://gtdb.ecogenomic.org/about#4%7C. 
  10. "bac120_r226.sp_label". https://data.gtdb.ecogenomic.org/releases/release226/226.0/auxillary_files/bac120_r226.sp_labels.tree. 
  11. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Wikidata ☰ Q26210615 entry