Biology:Erysipelotrichales
The Erysipelotrichia are a class of bacteria of the phylum Bacillota. The only order is Erysipelotrichales. Species of this class are common in the gut microbiome, as they have been isolated from swine manure[1] and increase in composition of the mouse gut microbiome for mice switched to diets high in fat.[2]
This class has the unusual phylogenetic position (according to phylogenomic and 16S rRNA studies) of branching within Mycoplasmatota, a phylum largely without peptidoglycan cell wall. Its ability to make a peptidoglycan and sporulate, combined with this position as well as Mycoplasmotota metagenomes with similar gene contents, imply that the Mycoplasmatotal lineages have independently reduced their cell walls.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[5]
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♦ Paraphyletic Erysipelotrichia
References
- ↑ Han, Il; Congeevaram, Shankar; Ki, Dong-Won; Oh, Byoung-Taek; Park, Joonhong (5 October 2010). "Bacterial community analysis of swine manure treated with autothermal thermophilic aerobic digestion". Applied Microbiology and Biotechnology 89 (3): 835–842. doi:10.1007/s00253-010-2893-8. PMID 20922382.
- ↑ Greiner, Thomas; Bäckhed, Fredrik (2011). "Effects of the gut microbiota on obesity and glucose homeostasis". Trends in Endocrinology & Metabolism 22 (4): 117–123. doi:10.1016/j.tem.2011.01.002. PMID 21353592.
- ↑ Field, CJ; Bowerman, KL; Hugenholtz, P (January 2024). "Multiple independent losses of sporulation and peptidoglycan in the Mycoplasmatales and related orders of the class Bacilli.". Microbial Genomics 10 (1). doi:10.1099/mgen.0.001176. PMID 38189216.
- ↑ J.P. Euzéby. "Erysipelotrichia". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/class/erysipelotrichia.
- ↑ Sayers. "Erysipelotrichia". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=526524&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=2&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
External links
Wikidata ☰ {{{from}}} entry
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