Biology:Halobacillus

From HandWiki

Halobacillus is a bacterial genus from the family of Bacillaceae.[1][2][3] Halobacillus species are gram positive, oxidase positive, catalase negative, rod shaped marine bacteria.[3] S.I. Paul et al. (2021)[3] isolated and characterized two species of Halobacillus (Halobacillus kuroshimensis and Halobacillus karajensis) from marine sponges (phylum: porifera) of the Saint Martin's Island of the Bay of Bengal, Bangladesh.[3] Single colonies are pin headed (very small) in sized and opaque in color.[3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
 
 
Halobacillus~1
 

H. locisalis Yoon et al. 2004

 
 

H. salicampi Kim et al. 2016

 
 
 
 
 
Halobacillus~
 

H. kuroshimensis Hua et al. 2007

 
 

H. sediminis Kim et al. 2015

 
 
 
 
 
Halobacillus~2
 
 

H. mangrovi Soto-Ramírez et al. 2008

 
 
 

H. karajensis Amoozegar et al. 2003

 
 
 

H. litoralis Spring et al. 1996

 
 

H. profundi Hua et al. 2007

 
 
 
 
 
 

H. dabanensis Liu et al. 2005

 
 
 

H. aidingensis Liu et al. 2005

 
 
 

H. trueperi Spring et al. 1996

 
 
 

H. faecis An et al. 2007

 
 

H. yeomjeoni Yoon et al. 2005

 
 
 
 
 
 
 
 
 
Halobacillus
 
 
 

H. campisalis Yoon et al. 2007

 
 

H. seohaensis Yoon, Kang & Oh 2008

 
 
 
 

H. alkaliphilus Romano et al. 2008

 
 

H. halophilus (Claus et al. 1984) Spring et al. 1996

 
 
 
 
 
 

H. fulvus Booncharoen et al. 2021

 
 

H. salinus Yoon, Kang & Park 2003

 
 
 
 
 

H. andaensis Wang et al. 2015

 
 

H. salsuginis Chen et al. 2009

 
 
 
 

H. naozhouensis Chen et al. 2012

 
 
 

H. amylolyticus Kim et al. 2023

 
 

H. shinanisalinarum Kim et al. 2023

 
 
 
 
 
 
 
 
 

Halobacillus salinarum Kim et al. 2023

 
 

Salimicrobium

 
 
 
 
 
 
Halobacillus
 
 
 

H. naozhouensis

 
 
 

"H. hunanensis" Peng et al. 2009

 
 

"H. ihumii" Konate et al. 2020

 
 
 
 
 

"H. massiliensis" Senghor et al. 2017

 
 
 

H. andaensis

 
 

H. campisalis

 
 
 
 
 
 
 

H. alkaliphilus

 
 

H. halophilus

 
 
 
 
 

H. mangrovi

 
 

H. yeomjeoni

 
 
 
 
 

H. fulvus

 
 
 

H. locisalis

 
 

H. salinus

 
 
 
 
 

H. kuroshimensis

 
 
 

H. dabanensis

 
 
 

H. karajensis

 
 
 

H. trueperi [incl. H. aidingensis]

 
 
 

H. faecis

 
 

H. litoralis

 
 
 
 
 
 
 
 
 
 

Unassigned species:

  • "H. blutaparonensis" Barbosa et al. 2006
  • "H. herbersteinensis" Ripka et al. 2005
  • "H. marinus" Panda et al. 2018
  • "H. rhizosphaerae" Yin et al. 2024
  • "H. styriensis" Ripka 2005
  • "H. thailandensis" Chaiyanan et al. 1999
  • "H. virgiliensis" Ripka et al. 2005

See also

References

  1. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named Halobacillus
  2. ↑ UniProt
  3. ↑ 3.0 3.1 3.2 3.3 3.4 Paul, Sulav Indra; Rahman, Md. Mahbubur; Salam, Mohammad Abdus; Khan, Md. Arifur Rahman; Islam, Md. Tofazzal (December 2021). "Identification of marine sponge-associated bacteria of the Saint Martin's island of the Bay of Bengal emphasizing on the prevention of motile Aeromonas septicemia in Labeo rohita". Aquaculture 545. doi:10.1016/j.aquaculture.2021.737156. ISSN 0044-8486. Bibcode: 2021Aquac.54537156P. 
  4. ↑ A.C. Parte. "Halobacillus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halobacillus. 
  5. ↑ C.L. Schoch. "Halobacillus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=45667&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Bergey's manual of systematic bacteriology. (2nd ed.). Dordrecht: Springer. 2009. ISBN 978-0-387-68489-5. 
  • Applications and Systematics of Bacillus and Relatives.. Chichester: John Wiley & Sons. 2002. ISBN 0-470-69521-8. 

Wikidata ☰ Q19939061 entry



Retrieved from "https://handwiki.org/wiki/index.php?title=Biology:Halobacillus&oldid=4056430"